RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NPDC1Q9NQX5 325 aaPredicted RBP13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 LRRK2Q5S007 2527 aa13.37□□□□□ -0.27
PDLIM5-202ENST00000318007 IGHV1-18A0A0C4DH31 117 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 OR6C6A6NF89 314 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 THBDP07204 575 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 CECR9P0C854 216 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF14P17017 642 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 GBX2P52951 348 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 INSL4Q14641 139 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SNAI3Q3KNW1 292 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SATL1Q86VE3 508 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 COMMD2Q86X83 199 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF101Q8IZC7 436 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 PRSS35Q8N3Z0 413 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 OR13C5Q8NGS8 318 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF75AQ96N20 296 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 OPALINQ96PE5 141 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 DOK1Q99704 481 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 TMED9Q9BVK6 235 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 DDX28Q9NUL7 540 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SPTAN1Q13813 2472 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ARPC4-TTLL3A0A0A6YYG9 625 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 TUBAL3A6NHL2 446 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 LCATP04180 440 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SERPINA5P05154 406 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 TACSTD2P09758 323 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 LIPAP38571 399 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 MAGEB1P43366 347 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 GDI2P50395 445 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 WDR38Q5JTN6 314 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF367Q7RTV3 350 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 OR2AE1Q8NHA4 323 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 SPTSSAQ969W0 71 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 MRPL48Q96GC5 212 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 KCNJ15Q99712 375 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 AMDHD2Q9Y303 409 aa13.36□□□□□ -0.27
PDLIM5-202ENST00000318007 A6NIN4 97 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 SULT1C4O75897 302 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 NGFP01138 241 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 IGKV3-15P01624 115 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 CRYGSP22914 178 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 GRB2P62993 217 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 MUL1Q969V5 352 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 RADILQ96JH8 1075 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 FAM206AQ9NX38 181 aa13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 GCN1Q92616 2671 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-202ENST00000318007 CBR1P16152 277 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ERVS71-1P61550 626 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 TBC1D28Q2M2D7 210 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 UBE2UQ5VVX9 321 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ABHD4Q8TB40 342 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 POM121L2Q96KW2 1035 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 SOX7Q9BT81 388 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 R4GMQ9 66 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ANKHD1Q8IWZ3 2542 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 HRNRQ86YZ3 2850 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 MRPS14O60783 128 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ACSM4P0C7M7 580 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 CALCRP30988 508 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 WNT5AP41221 380 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 KIR3DL2P43630 455 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 TPTEP56180 551 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ZNF829Q3KNS6 432 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 BCL2L15Q5TBC7 163 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 RNLSQ5VYX0 342 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 VHLLQ6RSH7 139 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 CCDC36Q8IYA8 594 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 OR8B12Q8NGG6 310 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 OR51A4Q8NGJ6 313 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 OR2G2Q8NGZ5 317 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 UFD1Q92890 307 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 PGAM5Q96HS1 289 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 COQ7Q99807 217 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 NDRG3Q9UGV2 375 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 ST6GALNAC2Q9UJ37 374 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 OR52A1Q9UKL2 312 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 HCFC1P51610 2035 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 DOPEY1Q5JWR5 2465 aa13.34□□□□□ -0.27
PDLIM5-202ENST00000318007 CADP27708 2225 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 A0A1W2PPK0 400 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 VGLL3A8MV65 326 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 J3QKU1 62 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 P2RY10O00398 339 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 ZNF254O75437 659 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 ZFPL1O95159 310 aa13.33□□□□□ -0.28
PDLIM5-202ENST00000318007 SSX1Q16384 188 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms