RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TMPRSS13Q9BYE2 586 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 MUC13Q9H3R2 512 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 C7orf69Q9H7B7 122 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 CYB5R1Q9UHQ9 305 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 LYVE1Q9Y5Y7 322 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 CDH10Q9Y6N8 788 aa14.99□□□□□ -0.01
TPM1-203ENST00000317516 LOC105371242A0A075B767 164 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 F5H5K5 113 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 CCNB2O95067 398 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 EPHA1P21709 976 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 CPT2P23786 658 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 TPTEP56180 551 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 BTG1P62324 171 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 CLEC12AQ5QGZ9 265 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 COLCA1Q6ZS62 124 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 C1orf229Q6ZS94 237 aaPredicted RBP14.98□□□□□ -0.01
TPM1-203ENST00000317516 C1QL2Q7Z5L3 287 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 DHFR2Q86XF0 187 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 LINC00346Q8IVM7 164 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 MUC20Q8N307 709 aaPredicted RBP14.98□□□□□ -0.01
TPM1-203ENST00000317516 OR2T4Q8NH00 348 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 JMJD8Q96S16 334 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 C1QTNF5Q9BXJ0 243 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 MAGIXQ9H6Y5 334 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 PATZ1Q9HBE1 687 aaKnown RBP14.98□□□□□ -0.01
TPM1-203ENST00000317516 TMEM100Q9NV29 134 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 IL20Q9NYY1 176 aa14.98□□□□□ -0.01
TPM1-203ENST00000317516 IQCF6A8MYZ5 107 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 AVPP01185 164 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 ACSM4P0C7M7 580 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 MDH2P40926 338 aaKnown RBP14.97□□□□□ -0.01
TPM1-203ENST00000317516 ERFP50548 548 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 RSPO1Q2MKA7 263 aaPredicted RBP14.97□□□□□ -0.01
TPM1-203ENST00000317516 USP43Q70EL4 1123 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 FITM2Q8N6M3 262 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 PROKR2Q8NFJ6 384 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 SPTSSAQ969W0 71 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 CCT8L2Q96SF2 557 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 SLC30A2Q9BRI3 323 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 EGLN3Q9H6Z9 239 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 GCM1Q9NP62 436 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 DCAF16Q9NXF7 216 aa14.97□□□□□ -0.01
TPM1-203ENST00000317516 LRRC30A6NM36 301 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 TMEM178BH3BS89 294 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 HAX1O00165 279 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 VENTXO95231 258 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 GASTP01350 101 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 LCATP04180 440 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 FPR2P25090 351 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 GGT2P36268 569 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 MAGEA2P43356 314 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 TRAP1Q12931 704 aaKnown RBP14.96□□□□□ -0.01
TPM1-203ENST00000317516 TRIM25Q14258 630 aaKnown RBP14.96□□□□□ -0.01
TPM1-203ENST00000317516 KRTAP27-1Q3LI81 207 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 FAM98BQ52LJ0 330 aaKnown RBP14.96□□□□□ -0.01
TPM1-203ENST00000317516 CFAP77Q6ZQR2 320 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 RASSF6Q6ZTQ3 369 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 OR9Q2Q8NGE9 314 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 MEGF10Q96KG7 1140 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 SUCNR1Q9BXA5 334 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 FN3KQ9H479 309 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 BAIAP2Q9UQB8 552 aa14.96□□□□□ -0.01
TPM1-203ENST00000317516 TRIM77I1YAP6 450 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 BHLHE40O14503 412 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 ATP6V1B2P21281 511 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 CALB2P22676 271 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 SLC6A9P48067 706 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 ZMYND11Q15326 602 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 ESCO2Q56NI9 601 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 LCN8Q6JVE9 175 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 PGAP1Q75T13 922 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 C1orf87Q8N0U7 546 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 CYB561A3Q8NBI2 242 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 AQP11Q8NBQ7 271 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 BHLHE23Q8NDY6 225 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 OR10AD1Q8NGE0 317 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 OR4C15Q8NGM1 316 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 BTBD10Q9BSF8 475 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 TSSK6Q9BXA6 273 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 REEP1Q9H902 201 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 WDR76Q9H967 626 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 TBC1D23Q9NUY8 699 aa14.95□□□□□ -0.02
TPM1-203ENST00000317516 MRPL22Q9NWU5 206 aaKnown RBP14.95□□□□□ -0.02
TPM1-203ENST00000317516 POLR3KQ9Y2Y1 108 aaPredicted RBP14.95□□□□□ -0.02
TPM1-203ENST00000317516 NOP16Q9Y3C1 178 aaKnown RBP14.95□□□□□ -0.02
TPM1-203ENST00000317516 M0R135 149 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 ZFP36P26651 326 aaKnown RBP14.94□□□□□ -0.02
TPM1-203ENST00000317516 PYCR1P32322 319 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 MMP16P51512 607 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 HILS1P60008 231 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 GK2Q14410 553 aaPredicted RBP14.94□□□□□ -0.02
TPM1-203ENST00000317516 MICAQ29983 383 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 ZNF181Q2M3W8 571 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 OR2T5Q6IEZ7 315 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 ZNF770Q6IQ21 691 aaPredicted RBP14.94□□□□□ -0.02
TPM1-203ENST00000317516 LNX2Q8N448 690 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 BPIFB2Q8N4F0 458 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 CCDC197Q8NCU1 140 aa14.94□□□□□ -0.02
TPM1-203ENST00000317516 OR2T29Q8NH02 315 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms