RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 IGLV3-16A0A075B6K0 115 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CCDC163A0A0D9SF12 145 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 A0A1B0GVT2 93 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ELOA3DA6NLF2 546 aaPredicted RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BKO60814 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BJP06899 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BOP23527 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 TEAD1P28347 426 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BBP33778 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BDP58876 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ACTBP60709 375 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BCP62807 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ACTG1P63261 375 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 B4GALNT1Q00973 533 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF763Q0D2J5 394 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST2H2BEQ16778 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 IQCJQ1A5X6 159 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ELOA3BQ3SY89 546 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF770Q6IQ21 691 aaPredicted RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ELOA3Q8NG57 546 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 OR6T1Q8NGN1 323 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 OR51A7Q8NH64 312 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 SMPDL3AQ92484 453 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BHQ93079 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CDC6Q99741 560 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BNQ99877 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST1H2BMQ99879 126 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 MYOTQ9UBF9 498 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 GRHPRQ9UBQ7 328 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ARRDC5A6NEK1 342 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CDRT15L2A8MXV6 281 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 HSBP1L1C9JCN9 74 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 RNASET2O00584 256 aaKnown RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 XRCC3O43542 346 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 RDH16O75452 317 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ERAL1O75616 437 aaKnown RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ADAP1O75689 374 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CD37P11049 281 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ST3GAL3Q11203 375 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 PMS2P11Q13670 270 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 SYPL1Q16563 259 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 MEPCEQ7L2J0 689 aaKnown RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 TMEFF1Q8IYR6 380 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 PNLDC1Q8NA58 520 aaKnown RBP10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 ADPRHL1Q8NDY3 354 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 CADM4Q8NFZ8 388 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 GPA33Q99795 319 aa10.55□□□□□ -0.72
LDLRAD3-201ENST00000315571 TEX13DA0A0J9YY54 714 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 METTL12A8MUP2 240 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 IGHEP01854 428 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 BCKDHBP21953 392 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 TIA1P31483 386 aaKnown RBP eCLIP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 THBS4P35443 961 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 VWA2Q5GFL6 755 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 MRM1Q6IN84 353 aaKnown RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 BTNL3Q6UXE8 466 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 LRRC70Q7Z2Q7 622 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 OR9K2Q8NGE7 335 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 LKAAEAR1Q8TD35 194 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF514Q96K75 400 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 NCOR1P1Q9H4R4 102 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 PCYT1BQ9Y5K3 369 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 A0A087WUU8 490 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 A0A1W2PPC4 97 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 SLC22A31A6NKX4 558 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 H0Y8X5 98 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 CTDSPLO15194 276 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 CD74P04233 296 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 PGA4P0DJD7 388 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 PGA5P0DJD9 388 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 TMIGD3P0DMS9 266 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 EFNB1P98172 346 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 CYCSP99999 105 aaKnown RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 CDK5Q00535 292 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 SLC9A3R2Q15599 337 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 WDR5BQ86VZ2 330 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 HIST3H2BBQ8N257 126 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 SLC25A38Q96DW6 304 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZCCHC3Q9NUD5 404 aaKnown RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF320A2RRD8 509 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 CD27P26842 260 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 PTGER1P34995 402 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 TDGF1P3P51864 188 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF385BQ569K4 471 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 FAM220AQ7Z4H9 259 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF584Q8IVC4 421 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 ZNF676Q8N7Q3 588 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 FAM213BQ8TBF2 198 aa10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 TSEN15Q8WW01 171 aaKnown RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 SAT2Q96F10 170 aaPredicted RBP10.54□□□□□ -0.72
LDLRAD3-201ENST00000315571 COX14Q96I36 57 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms