RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FCAMRQ8WWV6 532 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 SLC7A6Q92536 515 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 PNPLA2Q96AD5 504 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ADAT3Q96EY9 351 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ULBP2Q9BZM5 246 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 B3GNT4Q9C0J1 378 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 TMEM272A0A1B0GTI8 110 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 XRCC3O43542 346 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 CTAG2O75638 210 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 KRT33AO76009 404 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 GLSO94925 669 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-201ENST00000315286 CELA3AP09093 270 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 FTH1P19P0C7X4 201 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 CX3CR1P49238 355 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 GALK2Q01415 458 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 SNTB2Q13425 540 aaKnown RBP16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ATAD3CQ5T2N8 411 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 CLEC1AQ8NC01 280 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 OR8B12Q8NGG6 310 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 OR1J2Q8NGS2 313 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 FER1L6-AS2Q96M78 137 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF703Q9H7S9 590 aaPredicted RBP16.2■□□□□ 0.18
CCDC43-201ENST00000315286 MOB1AQ9H8S9 216 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
CCDC43-201ENST00000315286 RBMX2Q9Y388 322 aaKnown RBP16.2■□□□□ 0.18
CCDC43-201ENST00000315286 MT-ND4P03905 459 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 GIFP27352 417 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 DYRK1AQ13627 763 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 LYPD6Q86Y78 171 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 JAGN1Q8N5M9 183 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF845Q96IR2 970 aaPredicted RBP16.19■□□□□ 0.18
CCDC43-201ENST00000315286 SOX7Q9BT81 388 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 DPAGT1Q9H3H5 408 aa16.19■□□□□ 0.18
CCDC43-201ENST00000315286 A0A1B0GVI7 797 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 GNALP38405 381 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 NKX2-5P52952 324 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-201ENST00000315286 GRB2P62993 217 aaKnown RBP16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ABLIM2Q6H8Q1 611 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 DTX1Q86Y01 620 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF283Q8N7M2 679 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 GJC3Q8NFK1 279 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 OR6M1Q8NGM8 313 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 C7orf50Q9BRJ6 194 aaKnown RBP16.18■□□□□ 0.18
CCDC43-201ENST00000315286 CACNG6Q9BXT2 260 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 POU2F3Q9UKI9 436 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 RCE1Q9Y256 329 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 SLC5A6Q9Y289 635 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 TRAV6A0A075B6T7 132 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 OR5H15A6NDH6 313 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 KDM4BO94953 1096 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 TCRBP04435 133 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 HPNP05981 417 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ARSBP15848 533 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF84P51523 738 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 CCR6P51684 374 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 NUBP1P53384 320 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 BTG1P62324 171 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 MRPS10P82664 201 aaKnown RBP16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF813Q6ZN06 617 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 FAM57BQ71RH2 274 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ZBTB8BQ8NAP8 495 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-201ENST00000315286 C15orf40Q8WUR7 153 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 NUDT15Q9NV35 164 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 B4GALT7Q9UBV7 327 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 ZNF407Q9C0G0 2248 aa16.18■□□□□ 0.18
CCDC43-201ENST00000315286 CNOT1A5YKK6 2376 aaKnown RBP16.17■□□□□ 0.18
CCDC43-201ENST00000315286 LOC390937A0A1W2PQ73 354 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CIB4A0PJX0 185 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 GGT3PA6NGU5 568 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 FAM166BA8MTA8 275 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 ACOT7O00154 380 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 TPPPO94811 219 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CTSSP25774 331 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 C1orf100Q5SVJ3 147 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 AAED1Q7RTV5 226 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 ABHD12BQ7Z5M8 362 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-201ENST00000315286 NAA40Q86UY6 237 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 NKAIN3Q8N8D7 197 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 TTTY12Q9BZ98 90 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 GPR84Q9NQS5 396 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 DIABLOQ9NR28 239 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 RHBDD3Q9Y3P4 386 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 DNAJC13O75165 2243 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 E9PLN8 166 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 BDKRB2P30411 391 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 MAGEA5P43359 124 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 HIST1H3AP68431 136 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CBX3Q13185 183 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CCDC92Q53HC0 331 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-201ENST00000315286 HIST2H3PS2Q5TEC6 136 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 DNM1P46Q6ZS02 220 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 HIST2H3AQ71DI3 136 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 COMMD2Q86X83 199 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 OR1M1Q8NGA1 313 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 OR4D6Q8NGJ1 314 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 ABHD3Q8WU67 409 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CPNE4Q96A23 557 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-201ENST00000315286 ATG5Q9H1Y0 275 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 CRLF2Q9HC73 371 aa16.17■□□□□ 0.18
CCDC43-201ENST00000315286 HRASLSQ9HDD0 168 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms