RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 KIR2DS4P43632 304 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 AKR1C1Q04828 323 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 SSBP1Q04837 148 aaKnown RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 KIR2DS1Q14954 304 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 PLGLAQ15195 96 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 KMT5CQ86Y97 462 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 ZNF707Q96C28 371 aaPredicted RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 MUCL1Q96DR8 90 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 NUDT9Q9BW91 350 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 HTRA4P83105 476 aaPredicted RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 BATF2Q8N1L9 274 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 OR13C8Q8NGS7 320 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 GPR119Q8TDV5 335 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 CMTM3Q96MX0 182 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 SLC25A32Q9H2D1 315 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 FBXO34Q9NWN3 711 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 TPOP07202 933 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 EDN3P14138 238 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 TBXA2RP21731 343 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 RAB5CP51148 216 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 SLC25A1P53007 311 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 HTD2P86397 168 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 FOXF1Q12946 379 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 PRICKLE4Q2TBC4 344 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 CST9LP1Q5W188 147 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.42
SPAST-201ENST00000315285 ADGRL4Q9HBW9 690 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 SMCO4Q9NRQ5 59 aa12.46□□□□□ -0.42
SPAST-201ENST00000315285 KLRC4-KLRK1H3BQV0 150 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 CDC42EP2O14613 210 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 FOLR1P15328 257 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 PTGER4P35408 488 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 SYT13Q7L8C5 426 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 OR51F2Q8NH61 342 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 MARCH1Q8TCQ1 289 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 FOXQ1Q9C009 403 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 TIMM10BQ9Y5J6 103 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 H7C1Q1 480 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZFPL1O95159 310 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 RRADP55042 308 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 HNF4GQ14541 408 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 ETFBKMTQ8IXQ9 262 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZNF764Q96H86 408 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZNF705FA8MVS1 300 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 FFAR1O14842 300 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZNF705DP0CH99 300 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZNF705BP0CI00 300 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 PAN3Q58A45 887 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZBTB37Q5TC79 503 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 EMG1Q92979 244 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 NIPSNAP3BQ9BS92 247 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 MRPS2Q9Y399 296 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 HSD17B6O14756 317 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 NXPH3O95157 252 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 KITLGP21583 273 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 BCKDHBP21953 392 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 SUMO3P55854 103 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZIC1Q15915 447 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 Q6ZS52 159 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 OR52H1Q8NGJ2 320 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 IFI44Q8TCB0 444 aa12.45□□□□□ -0.42
SPAST-201ENST00000315285 MSI2Q96DH6 328 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 RPP25Q9BUL9 199 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 ZNF629Q9UEG4 869 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 PLEKHB1Q9UF11 243 aaPredicted RBP12.45□□□□□ -0.42
SPAST-201ENST00000315285 ARGFXA6NJG6 315 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TAAR5O14804 337 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 AADACP22760 399 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 CD300CQ08708 224 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 PXDC1Q5TGL8 231 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 ST8SIA4Q92187 359 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TTC9Q92623 222 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 WDR89Q96FK6 387 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 NRTNQ99748 197 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 PLA2G2FQ9BZM2 168 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 C12orf49Q9H741 205 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 JTBO76095 146 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 DUSP1P28562 367 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 OPRM1P35372 400 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 SHBQ15464 509 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 OR52W1Q6IF63 320 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 LYG2Q86SG7 212 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TMEM178AQ8NBL3 297 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms