RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LOC107986453A0A1B0GWG9 222 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ETV2O00321 342 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 TNFSF11O14788 317 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 RER1O15258 196 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ZIC3O60481 467 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 QDPRP09417 244 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 RFPL3SP0C7P2 107 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 POU3F2P20265 443 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 MMP15P51511 669 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 SLC25A53Q5H9E4 307 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 DNM1P34Q6PK57 102 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PLXDC2Q6UX71 529 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 C6orf15Q6UXA7 325 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 BIVMQ86UB2 503 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 OR10S1Q8NGN2 331 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 OR13C3Q8NGS6 347 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PHYHIPQ92561 330 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 SLAMF6Q96DU3 332 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 ZNF385AQ96PM9 386 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 MRPL13Q9BYD1 178 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 OR52A1Q9UKL2 312 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 C9orf172C9J069 976 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 LGALS8O00214 317 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 CDX4O14627 284 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 ARPC1BO15143 372 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 PEX14O75381 377 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 WDPCPO95876 746 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PGA4P0DJD7 388 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PGA3P0DJD8 388 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 LIFP15018 202 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 NUP62P37198 522 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 STARP49675 285 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 MLF1P58340 268 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ST8SIA4Q92187 359 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 WDR89Q96FK6 387 aaPredicted RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 S100A16Q96FQ6 103 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 AIFM2Q9BRQ8 373 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 G6PC2Q9NQR9 355 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ZNF69Q9UC07 566 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 FOXJ3Q9UPW0 622 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PCP4L1A6NKN8 68 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 L7N2F9 121 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 IGHG1P01857 330 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 GP1BAP07359 652 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PTH2RP49190 550 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 POU3F4P49335 361 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ART1P52961 327 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PITPNAQ00169 270 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 SFRP5Q5T4F7 317 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 FAM122CQ6P4D5 195 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 NHLRC1Q6VVB1 395 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 C3P1Q6ZMU1 363 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 TMPPEQ6ZT21 453 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 M1APQ8TC57 530 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 ZMAT3Q9HA38 289 aaKnown RBP11.03□□□□□ -0.64
RNF4-201ENST00000314289 P4HTMQ9NXG6 502 aa11.03□□□□□ -0.64
RNF4-201ENST00000314289 PCSK5Q92824 1860 aa11.02□□□□□ -0.64
RNF4-201ENST00000314289 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 ZNF726A6NNF4 738 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 TRAPPC6AO75865 159 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 CD59P13987 128 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 KLF9Q13886 244 aaPredicted RBP11.02□□□□□ -0.65
RNF4-201ENST00000314289 GLYATL3Q5SZD4 288 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 COMMD2Q86X83 199 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 JAGN1Q8N5M9 183 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 NOXO1Q8NFA2 376 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 OR6M1Q8NGM8 313 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 PAQR8Q8TEZ7 354 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 DOCK7Q96N67 2140 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 CA10Q9NS85 328 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 R4GMQ9 66 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 ICAM2P13598 275 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 CXCL2P19875 107 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 LAP3P28838 519 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 DCTDP32321 178 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 RAD52P43351 418 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 SGCAQ16586 387 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 PHYHD1Q5SRE7 291 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 HACD4Q5VWC8 232 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 SPINK14Q6IE38 97 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 ZNF227Q86WZ6 799 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 LRRC18Q8N456 261 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 SMIM4Q8WVI0 70 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 SPACA5Q96QH8 159 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 ANGPTL4Q9BY76 406 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 STEAP1Q9UHE8 339 aa11.02□□□□□ -0.65
RNF4-201ENST00000314289 FARSAQ9Y285 508 aaKnown RBP11.02□□□□□ -0.65
RNF4-201ENST00000314289 MYO7BQ6PIF6 2116 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 A0A1W2PNV4 684 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 GNALP38405 381 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 EIF1P41567 113 aaKnown RBP11.01□□□□□ -0.65
RNF4-201ENST00000314289 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
RNF4-201ENST00000314289 OR6S1Q8NH40 331 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms