RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLAMF6Q96DU3 332 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 COX4I2Q96KJ9 171 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 ATF6BQ99941 703 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 ABHD6Q9BV23 337 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 BPESC1Q9GZL8 116 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 COPS3Q9UNS2 423 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 BAIAP2Q9UQB8 552 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 SPEF1Q9Y4P9 236 aa10.27□□□□□ -0.77
SCFD1-201ENST00000311943 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.77
SCFD1-201ENST00000311943 GLCEO94923 617 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PTHP01270 115 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 IFNGP01579 166 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 ALPLP05186 524 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 DAOP14920 347 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PCSK6P29122 969 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 GSTT1P30711 240 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 ENTPD1P49961 510 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 EIF2B1Q14232 305 aaKnown RBP10.26□□□□□ -0.77
SCFD1-201ENST00000311943 ZSCAN26Q16670 478 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 KRTAP27-1Q3LI81 207 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 SLX4IPQ5VYV7 408 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 LPCAT4Q643R3 524 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 C12orf73Q69YU5 71 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PRSS57Q6UWY2 283 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PLEKHG7Q6ZR37 379 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PARP8Q8N3A8 854 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 OR1J2Q8NGS2 313 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 MBOAT4Q96T53 435 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 MOV10Q9HCE1 1003 aaKnown RBP10.26□□□□□ -0.77
SCFD1-201ENST00000311943 EIF3KQ9UBQ5 218 aaKnown RBP10.26□□□□□ -0.77
SCFD1-201ENST00000311943 IGHV4-61A0A0C4DH41 118 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 IGHV1-46P01743 117 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PPOXP50336 477 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 GK3PQ14409 553 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 PCK2Q16822 640 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 DMRTC1Q5HYR2 192 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 C10orf105Q8TEF2 133 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 INTS14Q96SY0 518 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 TEAD3Q99594 435 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 C1orf198Q9H425 327 aa10.26□□□□□ -0.77
SCFD1-201ENST00000311943 NDRG4Q9ULP0 352 aaKnown RBP10.26□□□□□ -0.77
SCFD1-201ENST00000311943 C17orf100A8MU93 164 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 IGHV3-13P01766 116 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 LCATP04180 440 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 COX5BP10606 129 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 PAX7P23759 505 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 GGTLC2Q14390 218 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 LRRN1Q6UXK5 716 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 SSX6Q7RTT6 188 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 PQLC1Q8N2U9 271 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 OR10AD1Q8NGE0 317 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 THEM6Q8WUY1 208 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 FAM168AQ92567 244 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 TBX5Q99593 518 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 HDHD2Q9H0R4 259 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
SCFD1-201ENST00000311943 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
SCFD1-201ENST00000311943 YLPM1P49750 1951 aaKnown RBP10.25□□□□□ -0.77
SCFD1-201ENST00000311943 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
SCFD1-201ENST00000311943 DLGAP1O14490 977 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 CLIC3O95833 236 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 FCGR1AP12314 374 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 GCH1P30793 250 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 SLC6A9P48067 706 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF92Q03936 586 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 GK2Q14410 553 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF718Q3SXZ3 478 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 AADACL4Q5VUY2 407 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 PLEKHA8Q96JA3 519 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 TBCCD1Q9NVR7 557 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ABCA1O95477 2261 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 M0R135 149 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ICMTO60725 284 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF205O95201 554 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF81P51508 661 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ESRRGP62508 458 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 GLYATL3Q5SZD4 288 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 AVPI1Q5T686 147 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 MBNL2Q5VZF2 373 aaKnown RBP10.24□□□□□ -0.77
SCFD1-201ENST00000311943 CLEC2AQ6UVW9 174 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 COLCA1Q6ZS62 124 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 ZNF799Q96GE5 643 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 RAB3IPQ96QF0 476 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-201ENST00000311943 COQ7Q99807 217 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 TOR3AQ9H497 397 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 MARCH7Q9H992 704 aa10.24□□□□□ -0.77
SCFD1-201ENST00000311943 PURGQ9UJV8 347 aaKnown RBP10.24□□□□□ -0.77
SCFD1-201ENST00000311943 VWC2LB2RUY7 222 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 TIMM8AO60220 97 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 HMGN1P05114 100 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 OTX1P32242 354 aaPredicted RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 RPS23P62266 143 aaKnown RBP10.23□□□□□ -0.77
SCFD1-201ENST00000311943 GFOD2Q3B7J2 385 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 USP51Q70EK9 711 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 GALNT4Q8N4A0 578 aa10.23□□□□□ -0.77
SCFD1-201ENST00000311943 RHNO1Q9BSD3 238 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms