RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 EXOSC7Q15024 291 aaKnown RBP16.2■□□□□ 0.18
SPSB4-201ENST00000310546 HMGN3Q15651 99 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 WDR38Q5JTN6 314 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 JAGN1Q8N5M9 183 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 MARCH1Q8TCQ1 289 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 MESP1Q9BRJ9 268 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 SLC17A5Q9NRA2 495 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 SLC22A13Q9Y226 551 aa16.2■□□□□ 0.18
SPSB4-201ENST00000310546 MRPS18BQ9Y676 258 aaKnown RBP16.2■□□□□ 0.18
SPSB4-201ENST00000310546 A0A087X0M5 115 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 A0A1B0GX30 115 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 TSPAN15O95858 294 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 IFNA6P05013 189 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 HIST1H1BP16401 226 aaKnown RBP16.19■□□□□ 0.18
SPSB4-201ENST00000310546 DDTP30046 118 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 ARRB1P49407 418 aaPredicted RBP16.19■□□□□ 0.18
SPSB4-201ENST00000310546 RSU1Q15404 277 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 SURF2Q15527 256 aaPredicted RBP16.19■□□□□ 0.18
SPSB4-201ENST00000310546 OR2A2Q6IF42 318 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 KIRREL2Q6UWL6 708 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 TRAPPC6BQ86SZ2 158 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 FJX1Q86VR8 437 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 CHST4Q8NCG5 386 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 LMAN2LQ9H0V9 348 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 SERGEFQ9UGK8 458 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 MMP24Q9Y5R2 645 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 TRPM6Q9BX84 2022 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 UMAD1C9J7I0 102 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 CX3CR1P49238 355 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 CHAF1BQ13112 559 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 RAB42Q8N4Z0 105 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 C10orf53Q8N6V4 93 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 SLC25A43Q8WUT9 341 aaPredicted RBP16.19■□□□□ 0.18
SPSB4-201ENST00000310546 OR5B2Q96R09 309 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 SLC5A7Q9GZV3 580 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 POLE3Q9NRF9 147 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 DOK5Q9P104 306 aa16.19■□□□□ 0.18
SPSB4-201ENST00000310546 SPINT1O43278 529 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 DNAJB6O75190 326 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PLGP00747 810 aaPredicted RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 KIR3DL2P43630 455 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SLC6A9P48067 706 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ASPHD2Q6ICH7 369 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 REC114Q7Z4M0 266 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SHISA5Q8N114 240 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SLC43A2Q8N370 569 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 RBM18Q96H35 190 aaKnown RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SUCNR1Q9BXA5 334 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PARPBPQ9NWS1 579 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3DA0A087WVF3 549 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3IA0A087WXS9 549 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3LB9A6J9 549 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3HP0C7X1 549 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ACAA2P42765 397 aaKnown RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SULT1A2P50226 295 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ZNF616Q08AN1 781 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 USF2Q15853 346 aaPredicted RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ZNF239Q16600 458 aaKnown RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 METRNLQ641Q3 311 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3CQ6IPX1 549 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 GKN2Q86XP6 184 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 TBC1D3Q8IZP1 549 aaPredicted RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ZDHHC22Q8N966 263 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ZCCHC10Q8TBK6 192 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 AMELYQ99218 206 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 UCK1Q9HA47 277 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SLC2A4RGQ9NR83 387 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 NME2P1O60361 137 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 DOK2O60496 412 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 ZNF888P0CJ79 500 aaPredicted RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PI3P19957 117 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 RASGEF1BQ0VAM2 473 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 RAB32Q13637 225 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 HNRNPA1L2Q32P51 320 aaKnown RBP16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PRSS54Q6PEW0 395 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 OR1J1Q8NGS3 322 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 MALSU1Q96EH3 234 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 MISP3Q96FF7 219 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 FOXN4Q96NZ1 517 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 CDC6Q99741 560 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PARP11Q9NR21 331 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 PLA2G2EQ9NZK7 142 aa16.18■□□□□ 0.18
SPSB4-201ENST00000310546 KIAA1549LQ6ZVL6 1849 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 A0A087WV62 115 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 F13BP05160 661 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 PCCBP05166 539 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 SQSTM1Q13501 440 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 MIDNQ504T8 468 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 SLC35D2Q76EJ3 337 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 OR5T3Q8NGG3 340 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 WFIKKN2Q8TEU8 576 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 C4orf45Q96LM5 186 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 DCBLD2Q96PD2 775 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 TRIM2Q9C040 744 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 METTL8Q9H825 291 aaKnown RBP16.17■□□□□ 0.18
SPSB4-201ENST00000310546 A0A1W2PP55 124 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 ARPC3O15145 178 aa16.17■□□□□ 0.18
SPSB4-201ENST00000310546 OR2C1O95371 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms