RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NIPSNAP1Q9BPW8 284 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 PTTG3PQ9NZH4 202 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 SAMHD1Q9Y3Z3 626 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 FBN3Q75N90 2809 aa16.74■□□□□ 0.27
PDZRN3-202ENST00000308537 RNF212BA8MTL3 300 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 SOX14O95416 240 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 IGHV2-70P01814 119 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 RAP2AP10114 183 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 HNF1AP20823 631 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 OTX1P32242 354 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 CRMP1Q14194 572 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 PCK2Q16822 640 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 OR2T2Q6IF00 324 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 CD300LDQ6UXZ3 194 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 GLCCI1Q86VQ1 547 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 ZNF283Q8N7M2 679 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 OR52L1Q8NGH7 329 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 TSSK6Q9BXA6 273 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 EGLN1Q9GZT9 426 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 REEP1Q9H902 201 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 ARMC1Q9NVT9 282 aa16.73■□□□□ 0.27
PDZRN3-202ENST00000308537 C5orf63A6NC05 138 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 MLNRO43193 412 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 PLPP2O43688 288 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 PRSS12P56730 875 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 TRAP1Q12931 704 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 FAM98BQ52LJ0 330 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 LINC01590Q5TEZ4 76 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 OR5AS1Q8N127 324 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 OR2Z1Q8NG97 314 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 OR51L1Q8NGJ5 315 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 OR9Q1Q8NGQ5 310 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 OR51F2Q8NH61 342 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 CANT1Q8WVQ1 401 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 ITLN1Q8WWA0 313 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 ATF6BQ99941 703 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 THTPAQ9BU02 230 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 WDR76Q9H967 626 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 DDX28Q9NUL7 540 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 TMEM106BQ9NUM4 274 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 IL19Q9UHD0 177 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 KCNG2Q9UJ96 466 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 COMMD3-BMI1R4GMX3 469 aa16.72■□□□□ 0.27
PDZRN3-202ENST00000308537 TVP23AA6NH52 213 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 IQCF6A8MYZ5 107 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 CLUP10909 449 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 SLC36A3Q495N2 470 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 OR8G5Q8NG78 346 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 OR10G2Q8NGC3 310 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 RAB1CQ92928 201 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 OR2V2Q96R30 315 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 PITX2Q99697 317 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 SLC30A2Q9BRI3 323 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 CHID1Q9BWS9 393 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 HCAR1Q9BXC0 346 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 TBC1D23Q9NUY8 699 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 NPTNQ9Y639 398 aa16.71■□□□□ 0.27
PDZRN3-202ENST00000308537 TRAV20A0A0B4J274 112 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 ARRDC5A6NEK1 342 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 AQP12BA6NM10 295 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 H0YL77 283 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 GYPBP06028 91 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 SLC25A1P53007 311 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 ECH1Q13011 328 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 GK3PQ14409 553 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 GK2Q14410 553 aaPredicted RBP16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 DNAL1Q4LDG9 190 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 ACSM5Q6NUN0 579 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 AQP12AQ8IXF9 295 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 OR10AD1Q8NGE0 317 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 OR2T4Q8NH00 348 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 TMEM158Q8WZ71 300 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 FEVQ99581 238 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 TMPRSS13Q9BYE2 586 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 GCM1Q9NP62 436 aa16.7■□□□□ 0.26
PDZRN3-202ENST00000308537 DOCK11Q5JSL3 2073 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 F5H5K5 113 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 SPI1P17947 270 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 MMP16P51512 607 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 SLC3A1Q07837 685 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 ZNF511Q8NB15 262 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 PROKR2Q8NFJ6 384 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 OR2T33Q8NG76 320 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 OR5L1Q8NGL2 311 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 ST7LQ8TDW4 575 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 RAB39BQ96DA2 213 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 TIMD4Q96H15 378 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 LRGUKQ96M69 825 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 BAIAP2Q9UQB8 552 aa16.69■□□□□ 0.26
PDZRN3-202ENST00000308537 DHRS12A0PJE2 317 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 GYG2O15488 501 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 HLA-DQA2P01906 255 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 TNFRSF1AP19438 455 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 PCMT1P22061 227 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 ZFP36P26651 326 aaKnown RBP16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 ZMYND11Q15326 602 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 SNAI3Q3KNW1 292 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 TEX30Q5JUR7 227 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 HS3ST5Q8IZT8 346 aa16.68■□□□□ 0.26
PDZRN3-202ENST00000308537 IQCF1Q8N6M8 205 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms