RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 HLA-DQB1P01920 261 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 ITGB2P05107 769 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 CD2P06729 351 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 CTSSP25774 331 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 TALDO1P37837 337 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 GUCA1AP43080 201 aaPredicted RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 PSMD7P51665 324 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 CCL11P51671 97 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 GRB2P62993 217 aaKnown RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 IL18Q14116 193 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 SLC10A1Q14973 349 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 SGCAQ16586 387 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 RIPPLY2Q5TAB7 128 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 ELMOD2Q8IZ81 293 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 ZNF433Q8N7K0 673 aaPredicted RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 LGALS14Q8TCE9 139 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 RBM24Q9BX46 236 aaKnown RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 MALT1Q9UDY8 824 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 NUFIP1Q9UHK0 495 aaKnown RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 FOXJ3Q9UPW0 622 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 PCDHGA9Q9Y5G4 932 aaKnown RBP10.47□□□□□ -0.73
TRIM40-205ENST00000307859 CSAG2Q9Y5P2 127 aa10.47□□□□□ -0.73
TRIM40-205ENST00000307859 MYO9AB2RTY4 2548 aa10.46□□□□□ -0.73
TRIM40-205ENST00000307859 H3BSH0 61 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 ACSM4P0C7M7 580 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 CALCBP10092 127 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 IGFBP3P17936 291 aaPredicted RBP10.46□□□□□ -0.74
TRIM40-205ENST00000307859 HSD11B1P28845 292 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 SCAND1P57086 179 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 SCN1BQ07699 218 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 UBE2NLQ5JXB2 153 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 HES5Q5TA89 166 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 FAM27BQ5VT28 67 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 GPR137CQ8N3F9 429 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 GJC3Q8NFK1 279 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF671Q8TAW3 534 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 CPT1CQ8TCG5 803 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF837Q96EG3 531 aaPredicted RBP10.46□□□□□ -0.74
TRIM40-205ENST00000307859 PBOV1Q9GZY1 135 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 RNF122Q9H9V4 155 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 TMEM38BQ9NVV0 291 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 LIPGQ9Y5X9 500 aa10.46□□□□□ -0.74
TRIM40-205ENST00000307859 A0A0G2JMP0 313 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 A0A0X1KG70 313 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 ANXA2P2A6NMY6 339 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 SYNGR4O95473 234 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 ANXA2P07355 339 aaKnown RBP10.45□□□□□ -0.74
TRIM40-205ENST00000307859 CD37P11049 281 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 SRYQ05066 204 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 MADCAM1Q13477 382 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 ASAH1Q13510 395 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 TAF13Q15543 124 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 RNFT1Q5M7Z0 435 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 PYHIN1Q6K0P9 492 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 LINGO2Q7L985 606 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 Q8N402 240 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 DNAAF1Q8NEP3 725 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 OR4M2Q8NGB6 313 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 OR13C3Q8NGS6 347 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 LINC00470Q9BZP3 86 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 CRLF2Q9HC73 371 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 MCTS1Q9ULC4 181 aaKnown RBP10.45□□□□□ -0.74
TRIM40-205ENST00000307859 ETV7Q9Y603 341 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 RTTNQ86VV8 2226 aa10.45□□□□□ -0.74
TRIM40-205ENST00000307859 TRGV5A0A0B4J1U4 118 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF724A8MTY0 619 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 P2RY10O00398 339 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 DOK2O60496 412 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 MAS1P04201 325 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 CST2P09228 141 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 CPN1P15169 458 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 SPNP16150 400 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 OTX1P32242 354 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 NR4A2P43354 598 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 PITPNBP48739 271 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 CX3CR1P49238 355 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 BCAP31P51572 246 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF121P58317 390 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 STK11Q15831 433 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 DEFB109BQ30KR1 87 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 CCDC92Q53HC0 331 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 BAIAP2L2Q6UXY1 529 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 GDPD3Q7L5L3 318 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 PRSS45Q7RTY3 260 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 SLC25A38Q96DW6 304 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 ALKBH3Q96Q83 286 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 BCO1Q9HAY6 547 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 ZNF275Q9NSD4 429 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 TAS2R4Q9NYW5 299 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 EMC3Q9P0I2 261 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 RABL2AQ9UBK7 228 aaPredicted RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 CKLFQ9UBR5 152 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 OR5V1Q9UGF6 321 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 RABL2BQ9UNT1 228 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
TRIM40-205ENST00000307859 KCNMB2Q9Y691 235 aa10.44□□□□□ -0.74
TRIM40-205ENST00000307859 MYO7BQ6PIF6 2116 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms