RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 MBNL2Q5VZF2 373 aaKnown RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 KCTD18Q6PI47 426 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 PRSS57Q6UWY2 283 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 BCDIN3DQ7Z5W3 292 aaKnown RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 LRP11Q86VZ4 500 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OR10S1Q8NGN2 331 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OTOSQ8NHW6 89 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 KLF14Q8TD94 323 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ST7LQ8TDW4 575 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SORCS2Q96PQ0 1159 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MNTQ99583 582 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 DOK1Q99704 481 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 KCNJ15Q99712 375 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 APOL4Q9BPW4 351 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ABHD6Q9BV23 337 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 YIPF3Q9GZM5 350 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MS4A5Q9H3V2 200 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SP140LQ9H930 580 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 PTTG3PQ9NZH4 202 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CGGBP1Q9UFW8 167 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 WARS2Q9UGM6 360 aaKnown RBP9.44□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 NOTCH2Q04721 2471 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 LOC100130705A0A1B0GUX0 176 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TMEM129A0AVI4 362 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ZNF670-ZNF695F2Z2N8 137 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SSX4O60224 188 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 IGHV4-39P01824 125 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CSF3P09919 207 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 HTR1FP30939 366 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MPV17P39210 176 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CX3CR1P49238 355 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 PRKXP51817 358 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 EFNA4P52798 201 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TESK1Q15569 626 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MEDAGQ5VYS4 303 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CLEC2AQ6UVW9 174 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SLC35F2Q8IXU6 374 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CYGBQ8WWM9 190 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 NEU4Q8WWR8 484 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ASB17Q8WXJ9 295 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MARS2Q96GW9 593 aaKnown RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 Q96MF0 132 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ZNF582Q96NG8 517 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 C1QTNF5Q9BXJ0 243 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TPK1Q9H3S4 243 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MYOZ1Q9NP98 299 aaPredicted RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CYSLTR2Q9NS75 346 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MYEF2Q9P2K5 600 aaKnown RBP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 POLQO75417 2590 aa9.43□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TPD52L2O43399 206 aaKnown RBP9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TBX1O43435 398 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 NDUFS7O75251 213 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 IGHV3-13P01766 116 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SELEP16581 610 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 LIPAP38571 399 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 ZNF81P51508 661 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 EFNB1P98172 346 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SLC34A1Q06495 639 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TMED1Q13445 227 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OGFRL1Q5TC84 451 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SPNS3Q6ZMD2 512 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 RHOUQ7L0Q8 258 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MRPL21Q7Z2W9 205 aaKnown RBP9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 Q96MT0 163 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 MROQ9BYG7 248 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 VCX3BQ9H321 246 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 POFUT1Q9H488 388 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 NIPAL2Q9H841 368 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 FAM118AQ9NWS6 357 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CLN6Q9NWW5 311 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 HAO2Q9NYQ3 351 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 IKZF2Q9UKS7 526 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 STARD10Q9Y365 291 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 N6AMT1Q9Y5N5 214 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 PDZD2O15018 2839 aa9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 C17orf100A8MU93 164 aa9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SLC16A6O15403 523 aa9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 XRCC2O43543 280 aa9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
CSPG4P2Y-201ENST00000306853 SBK2P0C263 348 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms