RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 NMNAT3Q96T66 252 aa17.2■□□□□ 0.34
RER1-201ENST00000306256 MRI1Q9BV20 369 aa17.2■□□□□ 0.34
RER1-201ENST00000306256 SRA1Q9HD15 236 aaKnown RBP17.2■□□□□ 0.34
RER1-201ENST00000306256 SPAG4Q9NPE6 437 aa17.2■□□□□ 0.34
RER1-201ENST00000306256 B9D1Q9UPM9 204 aa17.2■□□□□ 0.34
RER1-201ENST00000306256 SAMD4AQ9UPU9 718 aaKnown RBP17.2■□□□□ 0.34
RER1-201ENST00000306256 IGHV3OR16-10A0A075B7F0 116 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 DNAJC9-AS1A6NH13 148 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 RPS2P15880 293 aaKnown RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 SELEP16581 610 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 SPIBQ01892 262 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 COX10Q12887 443 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 RSPO1Q2MKA7 263 aaPredicted RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 TUSC1Q2TAM9 212 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 FAM201AQ5SY85 155 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 SLC27A4Q6P1M0 643 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 PGM2L1Q6PCE3 622 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 CFAP77Q6ZQR2 320 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 DOK3Q7L591 496 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 MOGAT3Q86VF5 341 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 JAZF1Q86VZ6 243 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 SLC26A10Q8NG04 563 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 OR4K13Q8NH42 304 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 C1orf147Q96MC9 270 aaPredicted RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 ZNF48Q96MX3 618 aaPredicted RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 ELAC2Q9BQ52 826 aaKnown RBP17.19■□□□□ 0.34
RER1-201ENST00000306256 MYLK2Q9H1R3 596 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 OR52D1Q9H346 318 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 FN3KQ9H479 309 aa17.19■□□□□ 0.34
RER1-201ENST00000306256 IQCF6A8MYZ5 107 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 HLA-DPB1P04440 258 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 WNT2P09544 360 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 HIST1H1CP16403 213 aaKnown RBP17.18■□□□□ 0.34
RER1-201ENST00000306256 SLC6A6P31641 620 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 CD80P33681 288 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 CMTM5Q96DZ9 223 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 SLC30A2Q9BRI3 323 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 SSBP3Q9BWW4 388 aaPredicted RBP17.18■□□□□ 0.34
RER1-201ENST00000306256 TMEM165Q9HC07 324 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 RPRD1BQ9NQG5 326 aaKnown RBP17.18■□□□□ 0.34
RER1-201ENST00000306256 LRCH1Q9Y2L9 728 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 PCDHGB1Q9Y5G3 927 aa17.18■□□□□ 0.34
RER1-201ENST00000306256 IFNL4K9M1U5 179 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 GMNNO75496 209 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 GADD45GO95257 159 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 RENP00797 406 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 SEMG1P04279 462 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 PMELP40967 661 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 PAX8Q06710 450 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 RFX4Q33E94 735 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 SLC18B1Q6NT16 456 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 KLBQ86Z14 1044 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 SGMS2Q8NHU3 365 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 PITX2Q99697 317 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 IFT27Q9BW83 186 aa17.17■□□□□ 0.34
RER1-201ENST00000306256 SOX21Q9Y651 276 aaPredicted RBP17.17■□□□□ 0.34
RER1-201ENST00000306256 F5H5K5 113 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 ACSM4P0C7M7 580 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 IGHV4-38-2P0DP08 117 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 HKR1P10072 659 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 PRTN3P24158 256 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 PAX2Q02962 417 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 KRTAP27-1Q3LI81 207 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 COLCA1Q6ZS62 124 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 SDR9C7Q8NEX9 313 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 PYURFQ96I23 114 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 TMEM246Q9BRR3 403 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 HCAR1Q9BXC0 346 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 FAM107BQ9H098 131 aa17.16■□□□□ 0.34
RER1-201ENST00000306256 OR6C68A6NDL8 312 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 ARPC3O15145 178 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 OR10H3O60404 316 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 FPR3P25089 353 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 PRDX6P30041 224 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 MSX2P35548 267 aaPredicted RBP17.15■□□□□ 0.34
RER1-201ENST00000306256 SMIM11AP58511 58 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 GNB2P62879 340 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 BAMBIQ13145 260 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 GK2Q14410 553 aaPredicted RBP17.15■□□□□ 0.34
RER1-201ENST00000306256 NAA40Q86UY6 237 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 PARP8Q8N3A8 854 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 OR52E2Q8NGJ4 325 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 ATF6BQ99941 703 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 MS4A7Q9GZW8 240 aaPredicted RBP17.15■□□□□ 0.34
RER1-201ENST00000306256 GORASP2Q9H8Y8 452 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 MED4Q9NPJ6 270 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 TMEM100Q9NV29 134 aa17.15■□□□□ 0.34
RER1-201ENST00000306256 IGHV2-70DA0A0C4DH43 119 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 HLA-DQA2P01906 255 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 LCATP04180 440 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 NOS3P29474 1203 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 GGT2P36268 569 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 TRAP1Q12931 704 aaKnown RBP17.14■□□□□ 0.33
RER1-201ENST00000306256 FOXL1Q12952 345 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 ZNF404Q494X3 552 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 SLC36A3Q495N2 470 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 BTNL3Q6UXE8 466 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 ZBTB46Q86UZ6 589 aa17.14■□□□□ 0.33
RER1-201ENST00000306256 C19orf18Q8NEA5 215 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms