RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 DMRTC1Q5HYR2 192 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 LPCAT3Q6P1A2 487 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 H1FNTQ75WM6 255 aaPredicted RBP13.49□□□□□ -0.25
CSDC2-201ENST00000306149 SLC25A45Q8N413 288 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 STEAP2Q8NFT2 490 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 OR52N4Q8NGI2 321 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 OR5M8Q8NGP6 311 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF501Q96CX3 271 aaPredicted RBP13.49□□□□□ -0.25
CSDC2-201ENST00000306149 EDEM2Q9BV94 578 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 DUX4Q9UBX2 424 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 A0A0D9SG52 128 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 IGHMP01871 453 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 CD74P04233 296 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 BIDP55957 195 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 HSF1Q00613 529 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 FOXF1Q12946 379 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 BEX5Q5H9J7 111 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 OR13C8Q8NGS7 320 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 ST8SIA2Q92186 375 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 MRPS24Q96EL2 167 aaKnown RBP13.49□□□□□ -0.25
CSDC2-201ENST00000306149 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF576Q9H609 170 aa13.49□□□□□ -0.25
CSDC2-201ENST00000306149 LDLRAD4O15165 306 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 ACHEP22303 614 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 DHRS2Q13268 280 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 TDGQ13569 410 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF345Q14585 488 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 ATXN7L3Q14CW9 347 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-201ENST00000306149 CDNFQ49AH0 187 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 COX15Q7KZN9 410 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 BEST3Q8N1M1 668 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 STPG2Q8N412 459 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 PXT1Q8NFP0 134 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 OR52H1Q8NGJ2 320 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 TMEM234Q8WY98 164 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 ADAT3Q96EY9 351 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-201ENST00000306149 GDF2Q9UK05 429 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-201ENST00000306149 EFNA2O43921 213 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 C3orf33Q6P1S2 294 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF546Q86UE3 836 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 PAQR4Q8N4S7 273 aaPredicted RBP13.48□□□□□ -0.25
CSDC2-201ENST00000306149 C11orf40Q8WZ69 217 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 SOX7Q9BT81 388 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
CSDC2-201ENST00000306149 SDK2Q58EX2 2172 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 TSPAN9O75954 239 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SLC2A1P11166 492 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 CXADRP78310 365 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 FAM74A1Q5RGS3 127 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 FAM69BQ5VUD6 431 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 PAPD4Q6PIY7 484 aaKnown RBP13.47□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF584Q8IVC4 421 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 KCNRGQ8N5I3 272 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 MICU1Q9BPX6 476 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 DNTTIP1Q9H147 329 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 RASL12Q9NYN1 266 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 VSIG4Q9Y279 399 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 NOP16Q9Y3C1 178 aaKnown RBP13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 TIAF1O95411 115 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 WDPCPO95876 746 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 HLA-AP01891 365 aaKnown RBP13.47□□□□□ -0.25
CSDC2-201ENST00000306149 TTRP02766 147 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 BCKDHBP21953 392 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 ANOS1P23352 680 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 UNC119Q13432 240 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 TRAPPC6BQ86SZ2 158 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 OR13C9Q8NGT0 318 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 PTX4Q96A99 478 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SLAMF6Q96DU3 332 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SEC61A2Q9H9S3 476 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 GPN3Q9UHW5 284 aaPredicted RBP13.47□□□□□ -0.25
CSDC2-201ENST00000306149 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
CSDC2-201ENST00000306149 MEGF11A6BM72 1044 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 RAB27BO00194 218 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 TOR1AO14656 332 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 NUDT21O43809 227 aaKnown RBP13.46□□□□□ -0.25
CSDC2-201ENST00000306149 SLC25A4P12235 298 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 GNB3P16520 340 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 CDAP32320 146 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 TAF13Q15543 124 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF813Q6ZN06 617 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 ZNF704Q6ZNC4 412 aaPredicted RBP13.46□□□□□ -0.25
CSDC2-201ENST00000306149 WDR13Q9H1Z4 485 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 CHST11Q9NPF2 352 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 SLC2A8Q9NY64 477 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 TNFSF18Q9UNG2 199 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 RHBDD3Q9Y3P4 386 aa13.46□□□□□ -0.25
CSDC2-201ENST00000306149 LOC390937A0A1W2PQ73 354 aa13.46□□□□□ -0.26
CSDC2-201ENST00000306149 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.26
CSDC2-201ENST00000306149 OR5H14A6NHG9 310 aa13.46□□□□□ -0.26
CSDC2-201ENST00000306149 A6NIZ1 184 aa13.46□□□□□ -0.26
CSDC2-201ENST00000306149 OR6C76A6NM76 312 aa13.46□□□□□ -0.26
CSDC2-201ENST00000306149 FAM25EA8MYX2 175 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms