RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NAA11Q9BSU3 229 aaPredicted RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 HCAR1Q9BXC0 346 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 Q9N2J8 555 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 MAN2C1Q9NTJ4 1040 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF337Q9Y3M9 751 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 WIF1Q9Y5W5 379 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 A0A1W2PQM1 296 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 C17orf105B2RV13 164 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 PHOX2AO14813 284 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 NUDT14O95848 222 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 AGR2O95994 175 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 IGHV2-70P01814 119 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 HLA-DQA2P01906 255 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 ZNF28P17035 718 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 P2RY4P51582 365 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 BTG2P78543 158 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 DCDP81605 110 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 EBPQ15125 230 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 DECR1Q16698 335 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 JMJD6Q6NYC1 403 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 CARFQ8N187 725 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 OR2G2Q8NGZ5 317 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 ZMAT3Q9HA38 289 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 OR5V1Q9UGF6 321 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 RALGAPA1Q6GYQ0 2036 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 CTNSO60931 367 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 MUC1P15941 1255 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 NDUFB7P17568 137 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 PNLIPRP2P54317 469 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 SRSF3P84103 164 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 INPP5JQ15735 1006 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 HIST2H3AQ71DI3 136 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 D2HGDHQ8N465 521 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 THAP3Q8WTV1 239 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 TMEM239Q8WW34 195 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 MIB2Q96AX9 1013 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 POM121Q96HA1 1249 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 SLC25A21Q9BQT8 299 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 ACTRT3Q9BYD9 372 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 TNFSF18Q9UNG2 199 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 LHX6Q9UPM6 363 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 ZNF106Q9H2Y7 1883 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 IGHV5-10-1A0A0J9YXX1 117 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 SFTPBP07988 381 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 PAX6P26367 422 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 MAP3K8P41279 467 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 SNRPNP63162 240 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 PDE7AQ13946 482 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 EIPR1Q53HC9 387 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 DCAF12Q5T6F0 453 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 ETV3LQ6ZN32 361 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 IL22RA1Q8N6P7 574 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 OR5AK2Q8NH90 309 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 ASB13Q8WXK3 278 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 PLEKHA1Q9HB21 404 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 LHX9Q9NQ69 397 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 CKLFQ9UBR5 152 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 C19orf25Q9UFG5 118 aaPredicted RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 CARHSP1Q9Y2V2 147 aaKnown RBP9.83□□□□□ -0.84
LSM3-201ENST00000306024 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
LSM3-201ENST00000306024 OTOGLQ3ZCN5 2332 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 C4orf51C9J302 202 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 H0YIG0 161 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 H7C417 338 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 PNLIPP16233 465 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 HMGN3Q15651 99 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 PRTGQ2VWP7 1150 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 DMKNQ6E0U4 476 aaPredicted RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 PWWP2BQ6NUJ5 590 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 GALNTL5Q7Z4T8 443 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 GABRG1Q8N1C3 465 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 JAGN1Q8N5M9 183 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 POMGNT2Q8NAT1 580 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 NAXEQ8NCW5 288 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 DEFB124Q8NES8 71 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 BPIFA2Q96DR5 249 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 MVB12AQ96EY5 273 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 KIRREL1Q96J84 757 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 LAT2Q9GZY6 243 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 CRLF2Q9HC73 371 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 MTFP1Q9UDX5 166 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 PRODH2Q9UF12 536 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 SMCO3A2RU48 225 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 HYAL3O43820 417 aaPredicted RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 GIMD1P0DJR0 217 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 FRKP42685 505 aaPredicted RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 PCBP4P57723 403 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 DHRS2Q13268 280 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 TRMT12Q53H54 448 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 AWAT1Q58HT5 328 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 ZNF485Q8NCK3 441 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 OR52R1Q8NGF1 315 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 FLVCR1-AS1Q8TAF5 88 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 TM4SF19Q96DZ7 209 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 LPAR4Q99677 370 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 SMIM3Q9BZL3 60 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 WDR13Q9H1Z4 485 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 ACAD8Q9UKU7 415 aa9.82□□□□□ -0.84
LSM3-201ENST00000306024 PTRH2Q9Y3E5 179 aaKnown RBP9.82□□□□□ -0.84
LSM3-201ENST00000306024 MMP24Q9Y5R2 645 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms