RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SCAND1P57086 179 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 C21orf58P58505 322 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 DCDP81605 110 aaKnown RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 BAHD1Q8TBE0 780 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 PHYHIPLQ96FC7 376 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 CTSFQ9UBX1 484 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 F10P00742 488 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 PI3P19957 117 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 HSD17B13Q7Z5P4 300 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ZFP62Q8NB50 900 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 STT3BQ8TCJ2 826 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 MTFP1Q9UDX5 166 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 NOSIPQ9Y314 301 aaKnown RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 H3BNC9 293 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 LRP3O75074 770 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ACKR3P25106 362 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 RPS27P42677 84 aaKnown RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 HTRA4P83105 476 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 INSL4Q14641 139 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 PLGLAQ15195 96 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 PNLIPRP3Q17RR3 467 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 C9orf135Q5VTT2 229 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF626Q68DY1 528 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 BHLHA9Q7RTU4 235 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 OR2W3Q7Z3T1 314 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ARHGEF39Q8N4T4 335 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 TXN2Q99757 166 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 TOLLIPQ9H0E2 274 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 SIGLEC7Q9Y286 467 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 SSC5DA1L4H1 1573 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF814B7Z6K7 855 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ABHD16AO95870 558 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 CALCRP30988 508 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ELLP55199 621 aaPredicted RBP11.66□□□□□ -0.54
COL3A1-201ENST00000304636 OR10J5Q8NHC4 309 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 KCNJ15Q99712 375 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 KCNE3Q9Y6H6 103 aa11.66□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF749O43361 778 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ICAM2P13598 275 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 CARD18P57730 90 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 PCK2Q16822 640 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ANKRD16Q6P6B7 361 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 CORO6Q6QEF8 472 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF610Q8N9Z0 462 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 GPR173Q9NS66 373 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 GHRLQ9UBU3 117 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 NHSQ6T4R5 1651 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 TOGARAM1Q9Y4F4 1720 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 RRASP10301 218 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 LANCL3Q6ZV70 420 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 TMPRSS7Q7RTY8 843 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 TNRC6CQ9HCJ0 1690 aaKnown RBP11.65□□□□□ -0.54
COL3A1-201ENST00000304636 GPR84Q9NQS5 396 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 SNCAP37840 140 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 PCBP3P57721 371 aaKnown RBP11.65□□□□□ -0.54
COL3A1-201ENST00000304636 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF813Q6ZN06 617 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 MAML2Q8IZL2 1156 aaPredicted RBP11.65□□□□□ -0.54
COL3A1-201ENST00000304636 MUC20Q8N307 709 aaPredicted RBP11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ARSGQ96EG1 525 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF75AQ96N20 296 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 CABLES2Q9BTV7 478 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 ASH2LQ9UBL3 628 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 PLSCR5A0PG75 271 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 PDGFBP01127 241 aaPredicted RBP11.65□□□□□ -0.54
COL3A1-201ENST00000304636 TNFSF4P23510 183 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 AGBL4Q5VU57 503 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 C16orf52Q8NHV5 167 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 SLC37A2Q8TED4 501 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 NAT6Q93015 286 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 TVP23CQ96ET8 276 aa11.65□□□□□ -0.54
COL3A1-201ENST00000304636 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 RAB13P51153 203 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 C19orf57Q0VDD7 668 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 PJVKQ0ZLH3 352 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 C9orf62Q8N4C0 152 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR4N2Q8NGD1 307 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 TINAGL1Q9GZM7 467 aaPredicted RBP11.64□□□□□ -0.55
COL3A1-201ENST00000304636 FGF21Q9NSA1 209 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 GNG12Q9UBI6 72 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 A6NCN8 305 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 F6UZH7 168 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 RUNX2Q13950 521 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms