RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MRPS14O60783 128 aaKnown RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZNF254O75437 659 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 TNFAIP8O95379 198 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PLAUP00749 431 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 LCKP06239 509 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PAX7P23759 505 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PSMB10P40306 273 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PRKXP51817 358 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 GTF2A1P52655 376 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 ECH1Q13011 328 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 DAZAP2Q15038 168 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 SNAI3Q3KNW1 292 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 KCTD18Q6PI47 426 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZNF773Q6PK81 442 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 KCTD20Q7Z5Y7 419 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 KRT77Q7Z794 578 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PRSS35Q8N3Z0 413 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 OR52N1Q8NH53 320 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 GATAD2BQ8WXI9 593 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZDHHC16Q969W1 377 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 LRRC46Q96FV0 321 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 TMEM204Q9BSN7 226 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 C1QTNF5Q9BXJ0 243 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 POFUT1Q9H488 388 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ACOT13Q9NPJ3 140 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 G6PC2Q9NQR9 355 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 FRRS1LQ9P0K9 344 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ST6GALNAC2Q9UJ37 374 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 CADP27708 2225 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ANKHD1Q8IWZ3 2542 aaKnown RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 A1L4Q6 167 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 C5orf49A4QMS7 147 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SHISA9B4DS77 424 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PRSS44E7EML9 344 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 J3QLW9 94 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 M0R135 149 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 IGLV3-1P01715 115 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 H2BFMP0C1H6 154 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SLC2A1P11166 492 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZNF19P17023 458 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 COL8A1P27658 744 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 HOXC12P31275 282 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 KIR2DL3P43628 341 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 KIR3DL2P43630 455 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 MMP16P51512 607 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZNF121P58317 390 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 NKX6-1P78426 367 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 GALK2Q01415 458 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PLP2Q04941 152 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 BSPH1Q075Z2 132 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 TBCEQ15813 527 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 SP5Q6BEB4 398 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 SSX8Q7RTT4 187 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 FAM222BQ8WU58 562 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 ZNF799Q96GE5 643 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SOX7Q9BT81 388 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 MROQ9BYG7 248 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 BABAM2Q9NXR7 383 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 IKZF2Q9UKS7 526 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 BLOC1S6Q9UL45 172 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 STARD10Q9Y365 291 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 SPTAN1Q13813 2472 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 IQCMA0A1B0GVH7 501 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 OGG1O15527 345 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 RPP14O95059 124 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 TTRP02766 147 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 KRT8P05787 483 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 EEF1B2P24534 225 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 PTAFRP25105 342 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 PCSK6P29122 969 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 CX3CR1P49238 355 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 GDI2P50395 445 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 RIDAP52758 137 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 WNT4P56705 351 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 PSMA6P60900 246 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 ERVS71-1P61550 626 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 ACTA2P62736 377 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 GRB2P62993 217 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 ACTG2P63267 376 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 ACSM1Q08AH1 577 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 TNK1Q13470 666 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 SPHARQ15513 63 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 WDR38Q5JTN6 314 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 UBE2UQ5VVX9 321 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 DRAM2Q6UX65 266 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 MEX3BQ6ZN04 569 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 RFPL4BQ6ZWI9 263 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 CATSPERDQ86XM0 798 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 KLBQ86Z14 1044 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 KLHL36Q8N4N3 616 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 TSPAN14Q8NG11 270 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 OR2G2Q8NGZ5 317 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 NEUROG1Q92886 237 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms