RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 OR6X1Q8NH79 312 aa12.9□□□□□ -0.34
SMG8-201ENST00000300917 ALKBH3Q96Q83 286 aaPredicted RBP12.9□□□□□ -0.34
SMG8-201ENST00000300917 DIABLOQ9NR28 239 aa12.9□□□□□ -0.34
SMG8-201ENST00000300917 GLTPQ9NZD2 209 aa12.9□□□□□ -0.34
SMG8-201ENST00000300917 E9PLN8 166 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CBR3O75828 277 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 TGIF1Q15583 401 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 C9orf135Q5VTT2 229 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CHST4Q8NCG5 386 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 OR51J1Q9H342 316 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 GPR84Q9NQS5 396 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 LRFN1Q9P244 771 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 OTOGLQ3ZCN5 2332 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 LOC100509620A0A075B734 347 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 LOC100289279A0A1B0GTE1 492 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 FAM166BA8MTA8 275 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 FABP7O15540 132 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 TLX3O43711 291 aaPredicted RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 CELA3AP09093 270 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 GTF2F2P13984 249 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CX3CR1P49238 355 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CYB561P49447 251 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 SUCLG1P53597 346 aaKnown RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 UBE2MP61081 183 aaKnown RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 TMEM244Q5VVB8 128 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 NAXEQ8NCW5 288 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 LIN37Q96GY3 246 aaPredicted RBP12.89□□□□□ -0.35
SMG8-201ENST00000300917 CNTD2Q9H8S5 307 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 NUBP2Q9Y5Y2 271 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 A0A1B0GVI7 797 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 RBBP9O75884 186 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 RLN1P04808 185 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 NTF4P34130 210 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 MNDAP41218 407 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 MAP2K6P52564 334 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 CDCP2Q5VXM1 449 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 OR9K2Q8NGE7 335 aa12.89□□□□□ -0.35
SMG8-201ENST00000300917 ZNF878C9JN71 531 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ACOT7O00154 380 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 TNFSF15O95150 251 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 MT-CO3P00414 261 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ACHEP22303 614 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ADH6P28332 368 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 RAD52P43351 418 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 OR52B4Q8NGK2 314 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 SIGLEC12Q96PQ1 595 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ULBP2Q9BZM5 246 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ETV7Q9Y603 341 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 TMEM235A6NFC5 223 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 XRCC3O43542 346 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ZNF20P17024 532 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 SSPNQ14714 243 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 CLPPQ16740 277 aaPredicted RBP12.88□□□□□ -0.35
SMG8-201ENST00000300917 PCK2Q16822 640 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 Q6ZTK2 550 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 PIGQQ9BRB3 760 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 ZNF275Q9NSD4 429 aaPredicted RBP12.88□□□□□ -0.35
SMG8-201ENST00000300917 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
SMG8-201ENST00000300917 M0QYG6 137 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 YES1P07947 543 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CSRP1P21291 193 aaKnown RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 STOMP27105 288 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 MMP16P51512 607 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CARD18P57730 90 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 ANKRD16Q6P6B7 361 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 IL22RA1Q8N6P7 574 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 PSMF1Q92530 271 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 OR2M2Q96R28 347 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 GHITMQ9H3K2 345 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 HSPB2A8KAH6 182 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 HRGP04196 525 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CD3DP04234 171 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 UBCP0CG48 685 aaKnown RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 PSMB1P20618 241 aaKnown RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 DLX5P56178 289 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 HSPB2Q16082 182 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 ZNF782Q6ZMW2 699 aaPredicted RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 ZNF101Q8IZC7 436 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 MOV10Q9HCE1 1003 aaKnown RBP12.87□□□□□ -0.35
SMG8-201ENST00000300917 A0A1W2PP11 408 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CD96P40200 585 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 H3F3AP84243 136 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
SMG8-201ENST00000300917 FGD2Q7Z6J4 655 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms