RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DCAF7P61962 342 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 CARD17Q5XLA6 110 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 COMMD2Q86X83 199 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 SMRP1Q8NCR6 262 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 FBXW5Q969U6 566 aa21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 ALX4Q9H161 411 aaPredicted RBP21.74■■□□□ 1.07
SPTSSA-201ENST00000298130 C13orf42A0A1B0GVH6 325 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 A0A1W2PR77 199 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 OR14I1A6ND48 311 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 OR2AT4A6NND4 320 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 KRBOX1C9JBD0 128 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 STARP49675 285 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 JMJD6Q6NYC1 403 aaPredicted RBP21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 A0A1W2PP11 408 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 TTRP02766 147 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 ABOP16442 354 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 RNF4P78317 190 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 FOXF1Q12946 379 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 MFAP5Q13361 173 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF260Q3ZCT1 412 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 FAM69BQ5VUD6 431 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 LHFPL5Q8TAF8 219 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 RHBDD3Q9Y3P4 386 aa21.73■■□□□ 1.07
SPTSSA-201ENST00000298130 SYT7O43581 403 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 FSTP19883 344 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 DLSTP36957 453 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 IL13RA1P78552 427 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 HSF1Q00613 529 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 ZC4H2Q9NQZ6 224 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 TAS2R3Q9NYW6 316 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 COMMD9Q9P000 198 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 IGHV1OR21-1A0A087WYE8 117 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF217O75362 1048 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 VSIG8P0DPA2 414 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF273Q14593 569 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 THRSPQ92748 146 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 SLAMF6Q96DU3 332 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 ZC3H10Q96K80 434 aaKnown RBP21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 LMAN1LQ9HAT1 526 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 CA14Q9ULX7 337 aa21.72■■□□□ 1.07
SPTSSA-201ENST00000298130 OR2T1O43869 369 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 AQP8O94778 261 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 ERCC1P07992 297 aaPredicted RBP21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 PI3P19957 117 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 BDKRB2P30411 391 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 C11orf87Q6NUJ2 197 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF813Q6ZN06 617 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 TMPPEQ6ZT21 453 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 OR52H1Q8NGJ2 320 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 OR51E1Q8TCB6 317 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 AQP3Q92482 292 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 WNT2BQ93097 391 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 KCNK17Q96T54 332 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 CPAMD8Q8IZJ3 1885 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 KANTRA0A1W2PQU2 76 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 RNF222A6NCQ9 220 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 SULT1C2O00338 296 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 TO15178 435 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 STK17BO94768 372 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 CD74P04233 296 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF101Q8IZC7 436 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 ZNF441Q8N8Z8 693 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 OR10S1Q8NGN2 331 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 ROBO4Q8WZ75 1007 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 BANF2Q9H503 90 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 FN3KRPQ9HA64 309 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 SCPEP1Q9HB40 452 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 SLC22A11Q9NSA0 550 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 FGF21Q9NSA1 209 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 KCNK7Q9Y2U2 307 aa21.71■■□□□ 1.07
SPTSSA-201ENST00000298130 A0A1B0GTI1 187 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 DISC1C4P0D8 188 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 MGMTP16455 207 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 H1FNTQ75WM6 255 aaPredicted RBP21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 ANGPTL5Q86XS5 388 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 SLC7A5P2Q9GIP4 190 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 MED9Q9NWA0 146 aa21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 GPN3Q9UHW5 284 aaPredicted RBP21.7■■□□□ 1.07
SPTSSA-201ENST00000298130 METTL21EPA6NDL7 271 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 EFNA2O43921 213 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 KLK2P20151 261 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 CD27P26842 260 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 CLVS2Q5SYC1 327 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 AWAT2Q6E213 333 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 ZNF704Q6ZNC4 412 aaPredicted RBP21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 LYPD6Q86Y78 171 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 SLC38A9Q8NBW4 561 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 TMEM104Q8NE00 496 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 EDEM2Q9BV94 578 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 PBOV1Q9GZY1 135 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 TNFSF18Q9UNG2 199 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 LMO7DNF2Z398 122 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 ZBTB25P24278 435 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 SSBP1Q04837 148 aaKnown RBP21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 C1orf100Q5SVJ3 147 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 TMEM244Q5VVB8 128 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 OR10H5Q8NGA6 315 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 IFT46Q9NQC8 304 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 FAM206AQ9NX38 181 aa21.7■■□□□ 1.06
SPTSSA-201ENST00000298130 A0A1W2PNR3 127 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms