RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 RAB6AP20340 208 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 DNASE1P24855 282 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 PMPCAQ10713 525 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF767PQ75MW2 155 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 NLRC3Q7RTR2 1065 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 MEIOBQ8N635 442 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 OR51E1Q8TCB6 317 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 SEH1LQ96EE3 360 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 TMEM138Q9NPI0 162 aa21.23■□□□□ 0.99
TRIM54-201ENST00000296098 MASP2O00187 686 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 CD3DP04234 171 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF17P17021 662 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 GALK2Q01415 458 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 DCAF12Q5T6F0 453 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 OR10K2Q6IF99 312 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 ARMC10Q8N2F6 343 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 OR6N1Q8NGY5 312 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 CNTD2Q9H8S5 307 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 PNRC2Q9NPJ4 139 aaKnown RBP21.22■□□□□ 0.99
TRIM54-201ENST00000296098 MYEF2Q9P2K5 600 aaKnown RBP21.22■□□□□ 0.99
TRIM54-201ENST00000296098 MGAT4CQ9UBM8 478 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 A0A1B0GTI1 187 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 RER1O15258 196 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 ZIC3O60481 467 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 EIF1BO60739 113 aaKnown RBP21.22■□□□□ 0.99
TRIM54-201ENST00000296098 STK17BO94768 372 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 PRKXP51817 358 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 STEAP1BQ6NZ63 245 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 GABRG1Q8N1C3 465 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 SLC22A24Q8N4F4 322 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 SPICQ8N5J4 248 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 OR52N4Q8NGI2 321 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 OR5D14Q8NGL3 314 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 OR2T35Q8NGX2 323 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 GLTPQ9NZD2 209 aa21.22■□□□□ 0.99
TRIM54-201ENST00000296098 TNFRSF10AO00220 468 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 TSC22D2O75157 780 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 FCER2P06734 321 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF20P17024 532 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 RAB3AP20336 220 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 HTR2BP41595 481 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 CSNK1A1P48729 337 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 ZNF121P58317 390 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-201ENST00000296098 TAS2R19P59542 299 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 C6orf183Q5T699 404 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 OR51S1Q8NGJ8 323 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 OR8S1Q8NH09 359 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 SNAPC3Q92966 411 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 TMEM41AQ96HV5 264 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 UQCC2Q9BRT2 126 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 SLC23A1Q9UHI7 598 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 FBXO4Q9UKT5 387 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 CD63P08962 238 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 CSNK2A1P68400 391 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-201ENST00000296098 MOGAT2Q3SYC2 334 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 TCEAL6Q6IPX3 200 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 COMMD2Q86X83 199 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 OR8B12Q8NGG6 310 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 OR13C9Q8NGT0 318 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 TCEAL3Q969E4 200 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 NAA11Q9BSU3 229 aaPredicted RBP21.21■□□□□ 0.99
TRIM54-201ENST00000296098 SLCO5A1Q9H2Y9 848 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 RAB22AQ9UL26 194 aa21.21■□□□□ 0.99
TRIM54-201ENST00000296098 VAMP5O95183 116 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 BPNT1O95861 308 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 CX3CR1P49238 355 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 RPS18P62269 152 aaKnown RBP21.2■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF468Q5VIY5 522 aaPredicted RBP21.2■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF529Q6P280 563 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 ABHD12BQ7Z5M8 362 aaPredicted RBP21.2■□□□□ 0.98
TRIM54-201ENST00000296098 PPP1R32Q7Z5V6 425 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 TMEM229BQ8NBD8 167 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 DVL3Q92997 716 aaPredicted RBP21.2■□□□□ 0.98
TRIM54-201ENST00000296098 LOXL2Q9Y4K0 774 aa21.2■□□□□ 0.98
TRIM54-201ENST00000296098 IGHV3-15A0A0B4J1V0 119 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 METTL21EPA6NDL7 271 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 NPIPA2E9PIF3 369 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 NPIPA3F8WFD2 350 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 CBR3O75828 277 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 RLN1P04808 185 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 ERCC1P07992 297 aaPredicted RBP21.19■□□□□ 0.98
TRIM54-201ENST00000296098 VSIG10L2P0DP72 767 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 SLC2A1P11166 492 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 OTX2P32243 289 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 GRB2P62993 217 aaKnown RBP21.19■□□□□ 0.98
TRIM54-201ENST00000296098 POU4F3Q15319 338 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 SLC36A1Q7Z2H8 476 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 ACBD4Q8NC06 268 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 B3GNT4Q9C0J1 378 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 G3V3Q6 166 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 SGCAQ16586 387 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 C10orf128Q5T292 105 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 RAB12Q6IQ22 244 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 TMEM105Q8N8V8 129 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 RHBDD1Q8TEB9 315 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 TMEM54Q969K7 222 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 SGCZQ96LD1 299 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 UCN2Q96RP3 112 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 PIGQQ9BRB3 760 aa21.19■□□□□ 0.98
TRIM54-201ENST00000296098 ZNF416Q9BWM5 594 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms