RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 NUDT8Q8WV74 236 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 GNPNAT1Q96EK6 184 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 AKR1E2Q96JD6 320 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ARHGDIGQ99819 225 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS5A0A0G2JLQ3 304 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 A0A0G2JNG1 304 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 NKX6-3A6NJ46 265 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS3K7RE56 304 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TGM1P22735 817 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 BPIFB3P59826 476 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 EXOSC2Q13868 293 aaKnown RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS5Q14953 304 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TFAP2EQ6VUC0 442 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 DUSP22Q9NRW4 184 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SLC5A10A0PJK1 596 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 GLIPR1L1Q6UWM5 242 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 RFLNAQ6ZTI6 216 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 CORO2AQ92828 525 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 BCO1Q9HAY6 547 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 MOKQ9UQ07 419 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TMEM202A6NGA9 273 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ZNF264O43296 627 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 ADRA2CP18825 462 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 FCGR2CP31995 323 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 OR1D4P47884 311 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TMEM64Q6YI46 380 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 OR2M7Q8NG81 312 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TCTN2Q96GX1 697 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 SLC35E1Q96K37 410 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 RIMS4Q9H426 269 aaPredicted RBP9.02□□□□□ -0.97
COL6A3-201ENST00000295550 A0A0G2JMZ2 1700 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.97
COL6A3-201ENST00000295550 TEX50A0A1B0GTY4 177 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 CCKARP32238 428 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 EPHA5P54756 1037 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SLC35A1P78382 337 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 AANATQ16613 207 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 RTL8BQ17RB0 113 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 MMP7P09237 267 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 DGCR2P98153 550 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 HES1Q14469 280 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 FBXW5Q969U6 566 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 OR8B4Q96RC9 309 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NDFIP1Q9BT67 221 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 DNMT3BQ9UBC3 853 aaKnown RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 hCG_1809904A0A1W2PP81 198 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 A0A1W2PPE2 198 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 A0A1W2PR64 198 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 A0A1W2PRV1 198 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SEMA4FO95754 770 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NQO2P16083 231 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 CSF2RBP32927 897 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 DPY19L2P2Q6ZN68 376 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 EMG1Q92979 244 aaKnown RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 C8orf33Q9H7E9 229 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 DEGS1O15121 323 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 GPR75O95800 540 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SOX18P35713 384 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 CEBPEQ15744 281 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SLC48A1Q6P1K1 146 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PTOV1Q86YD1 416 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PTDSS2Q9BVG9 487 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ENPP1P22413 925 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PSMB6P28072 239 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 BCL6P41182 706 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ZNF85Q03923 595 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ADIPOR2Q86V24 386 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 C12orf76Q8N812 135 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 MACROD1Q9BQ69 325 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 OR7C2O60412 319 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PMCHP20382 165 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ZBTB37Q5TC79 503 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 GRAMD2AQ8IUY3 354 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PDXPQ96GD0 296 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 LRRC30A6NM36 301 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PLPP1O14494 284 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SELENOFO60613 162 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SLC25A6P12236 298 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 MGMTP16455 207 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NKX2-1P43699 371 aaPredicted RBP9.01□□□□□ -0.97
COL6A3-201ENST00000295550 FOXK2Q01167 660 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 PPP1R3BQ86XI6 285 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 SMIM12Q96EX1 92 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NMNAT3Q96T66 252 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 MED18Q9BUE0 208 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 NKX2-4Q9H2Z4 354 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 GPR31O00270 319 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 AQP8O94778 261 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 AKR1C3P42330 323 aa9.01□□□□□ -0.97
COL6A3-201ENST00000295550 CLDN17P56750 224 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms