RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 BOD1Q96IK1 185 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ISG20L2Q9H9L3 353 aaKnown RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 A0A075B6Q4 140 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 PNMA8CA0A1B0GUJ8 204 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 DOK2O60496 412 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 UBL3O95164 117 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 DBHP09172 617 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 CPEP16870 476 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 APEX1P27695 318 aaKnown RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF83P51522 516 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 IDH3GP51553 393 aaPredicted RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 PPP5CP53041 499 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 PCBD1P61457 104 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF45Q02386 682 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 DOC2BQ14184 412 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 PPA1Q15181 289 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 SSX1Q16384 188 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 OR2G6Q5TZ20 316 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 MFSD4AQ8N468 514 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 C17orf78Q8N4C9 275 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF75AQ96N20 296 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 ALG8Q9BVK2 526 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 FAIMQ9NVQ4 179 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 NPAP1Q9NZP6 1156 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 CRNNQ9UBG3 495 aaPredicted RBP13.18□□□□□ -0.3
CCDC140-201ENST00000295226 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 SSR3Q9UNL2 185 aa13.18□□□□□ -0.3
CCDC140-201ENST00000295226 UTP20O75691 2785 aaKnown RBP13.17□□□□□ -0.3
CCDC140-201ENST00000295226 J3QLW9 94 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 J3QRK9 145 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 SYNGR3O43761 229 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 PFDN1O60925 122 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 SULT1C4O75897 302 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF19P17023 458 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 ARR3P36575 388 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 OR12D2P58182 307 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 GALK2Q01415 458 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 SCRN3Q0VDG4 424 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 GALEQ14376 348 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
CCDC140-201ENST00000295226 ELFN2Q5R3F8 820 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 SYT9Q86SS6 491 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 NANOS1Q8WY41 292 aaKnown RBP13.17□□□□□ -0.3
CCDC140-201ENST00000295226 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 COQ7Q99807 217 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 ELOVL3Q9HB03 270 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 ETAA1Q9NY74 926 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
CCDC140-201ENST00000295226 FBXL3Q9UKT7 428 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 AMDHD2Q9Y303 409 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
CCDC140-201ENST00000295226 HEATR1Q9H583 2144 aaKnown RBP13.16□□□□□ -0.3
CCDC140-201ENST00000295226 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 BMP4P12644 408 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 CBR1P16152 277 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 HTR5AP47898 357 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 ACTC1P68032 377 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 ACTA1P68133 377 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 ACSM1Q08AH1 577 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 TPBGQ13641 420 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 KRT77Q7Z794 578 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 CCDC36Q8IYA8 594 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 OR1F12Q8NHA8 337 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 SSC4DQ8WTU2 575 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 RNF133Q8WVZ7 376 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 HSD17B8Q92506 261 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 LRRC46Q96FV0 321 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 OR8B4Q96RC9 309 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 CADP27708 2225 aa13.16□□□□□ -0.3
CCDC140-201ENST00000295226 HELZ2Q9BYK8 2649 aaKnown RBP13.15□□□□□ -0.3
CCDC140-201ENST00000295226 ISPDA4D126 451 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 F5H5K5 113 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 M0R1B8 84 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
CCDC140-201ENST00000295226 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF14P17017 642 aaPredicted RBP13.15□□□□□ -0.3
CCDC140-201ENST00000295226 CCNOP22674 350 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 ANOS1P23352 680 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 PSMB10P40306 273 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 PRKXP51817 358 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 RAB35Q15286 201 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 TAF13Q15543 124 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 ZNF684Q5T5D7 378 aa13.15□□□□□ -0.3
CCDC140-201ENST00000295226 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms