RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NME1P15531 152 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 ENPP1P22413 925 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GZMKP49863 264 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 SMAD4Q13485 552 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 ASAH1Q13510 395 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 TAF9Q16594 264 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 WIPI1Q5MNZ9 446 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 OR4C16Q8NGL9 310 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GPBAR1Q8TDU6 330 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 NAT6Q93015 286 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MMP25Q9NPA2 562 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.31□□□□□ -1.72
UBR1-201ENST00000290650 MMACHCQ9Y4U1 282 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 C5orf49A4QMS7 147 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SLC43A1O75387 559 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MED6O75586 246 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 DIRAS3O95661 229 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 BPNT1O95861 308 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ABHD16AO95870 558 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 IGHV4-34P06331 123 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CXCL3P19876 107 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZNF85Q03923 595 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MLC1Q15049 377 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ST3GAL2Q16842 350 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MANEAQ5SRI9 462 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 OPN5Q6U736 354 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZFP82Q8N141 532 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SLC39A7Q92504 469 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CDH20Q9HBT6 801 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 IGHV1OR21-1A0A087WYE8 117 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 BLACEA4D250 179 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MEGF11A6BM72 1044 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 AIPO00170 330 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CYR61O00622 381 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MBTPS2O43462 519 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GPRIN2O60269 458 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 TP53P04637 393 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 PTAFRP25105 342 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 THBS2P35442 1172 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MAP2K6P52564 334 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 DLX5P56178 289 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 RPS4XP62701 263 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 OR51A2Q8NGJ7 313 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 OR1J2Q8NGS2 313 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MCTS1Q9ULC4 181 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 KLHDC2Q9Y2U9 406 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PLXNA4Q9HCM2 1894 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SIGLEC5O15389 551 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 NGFRP08138 427 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CYB561P49447 251 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TLE1Q04724 770 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SIGLEC14Q08ET2 396 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TPBGQ13641 420 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 EDDM3AQ14507 147 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SLC17A1Q14916 467 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SPINK14Q6IE38 97 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ADGRE4PQ86SQ3 457 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 UTP23Q9BRU9 249 aaKnown RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 PBOV1Q9GZY1 135 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 RPS10P5Q9NQ39 176 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 GDF2Q9UK05 429 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 RGS13O14921 159 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 PNLIPP16233 465 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 AVPR2P30518 371 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CCR5P51681 352 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 P2RX3P56373 397 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF767PQ75MW2 155 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 RAB11FIP2Q7L804 512 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR1N1Q8NGS0 311 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 FNDC9Q8TBE3 224 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SCGB1C1Q8TD33 95 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 C11orf40Q8WZ69 217 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 KCTD12Q96CX2 325 aaKnown RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF681Q96N22 645 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 PRRT1Q99946 306 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 LAT2Q9GZY6 243 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CES1P1Q9UKY3 287 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF175Q9Y473 711 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 V9GYH0 126 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ARRDC5A6NEK1 342 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 BHLHE40O14503 412 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 PHF1O43189 567 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 GMDSO60547 372 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 NKX2-2O95096 273 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 IGHV3-13P01766 116 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 IGHV3-7P01780 117 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CT45A8P0DMV1 189 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CT45A9P0DMV2 189 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 HMGA2P52926 109 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SLC35A1P78382 337 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 DMWDQ09019 674 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SP6Q3SY56 376 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CT45A2Q5DJT8 189 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SLC22A24Q8N4F4 322 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 GABRG3Q99928 467 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 MESP1Q9BRJ9 268 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms