RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
SCAF4-201ENST00000286835 NANPQ8TBE9 248 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 VSTM2LQ96N03 204 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 MED29Q9NX70 200 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 RASL12Q9NYN1 266 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 LRP12Q9Y561 859 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 PNPP00491 289 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 KLK3P07288 261 aaPredicted RBP12.05□□□□□ -0.48
SCAF4-201ENST00000286835 CTLA4P16410 223 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 KCNJ3P48549 501 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 PPIAP62937 165 aaKnown RBP12.05□□□□□ -0.48
SCAF4-201ENST00000286835 EGR3Q06889 387 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 AVPI1Q5T686 147 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 LYG2Q86SG7 212 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF283Q8N7M2 679 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF321PQ8N8H1 164 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 CLEC1AQ8NC01 280 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
SCAF4-201ENST00000286835 A0A0A6YYH2 397 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 A6NJ64 397 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 ADAP1O75689 374 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 TLE3Q04726 772 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 CDC20BQ86Y33 519 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 ASB17Q8WXJ9 295 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 TOMM40LQ969M1 308 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
SCAF4-201ENST00000286835 TMEM218A2RU14 115 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 PLRG1O43660 514 aaKnown RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CT45A8P0DMV1 189 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CT45A9P0DMV2 189 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 GGTLC2Q14390 218 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 PLEKHN1Q494U1 663 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CT45A2Q5DJT8 189 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF704Q6ZNC4 412 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF595Q8IYB9 648 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 KCNRGQ8N5I3 272 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 SLC22A11Q9NSA0 550 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 PRSS37A4D1T9 235 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 METTL12A8MUP2 240 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 NFYBP25208 207 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 RPL27P61353 136 aaKnown RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 SULT4A1Q9BR01 284 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 HIF3AQ9Y2N7 669 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 MRPS18BQ9Y676 258 aaKnown RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 TMED7-TICAM2A0A0A6YYA0 188 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 LMX1BO60663 402 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 GP1BAP07359 652 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CHRFAM7AQ494W8 412 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 TMEM229BQ8NBD8 167 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 ADAD2Q8NCV1 583 aaKnown RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 NUBPLQ8TB37 319 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 MEMO1Q9Y316 297 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 TPPPO94811 219 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CRABP1P29762 137 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 NR0B2Q15466 257 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 CDC6Q99741 560 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 WDR13Q9H1Z4 485 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 C14orf166Q9Y224 244 aaKnown RBP12.04□□□□□ -0.48
SCAF4-201ENST00000286835 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
SCAF4-201ENST00000286835 WDR87Q6ZQQ6 2873 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 TRAV36DV7A0A075B6V5 113 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 C9J4A7 227 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ABCD4O14678 606 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 MPGP29372 298 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 SLC25A1P53007 311 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 CYCSP99999 105 aaKnown RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 MPPED2Q15777 294 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ROBO4Q8WZ75 1007 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 PMM1Q92871 262 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 BMFQ96LC9 184 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 NUDT9Q9BW91 350 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 SEMA6CQ9H3T2 930 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 EHFQ9NZC4 300 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ICAM5Q9UMF0 924 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 VSIG4Q9Y279 399 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 MTRF1O75570 445 aaKnown RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 MGAT2Q10469 447 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ABCA7Q8IZY2 2146 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 MR1Q95460 341 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 LCORQ96JN0 433 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 NIT2Q9NQR4 276 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-201ENST00000286835 KLRF1Q9NZS2 232 aa12.03□□□□□ -0.48
SCAF4-201ENST00000286835 C9orf170A2RU37 121 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms