RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PCDHB10Q9UN67 800 aa11.83□□□□□ -0.52
SLC28A1-201ENST00000286749 OR2AT4A6NND4 320 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 C10orf142B7Z368 130 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 AKR1C4P17516 323 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 HLA-GP17693 338 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 RAB3AP20336 220 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 ABCD3P28288 659 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 BDKRB2P30411 391 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 GNALP38405 381 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 DLX2Q07687 328 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 ELAVL1Q15717 326 aaKnown RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 RAB12Q6IQ22 244 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 RTN4RL2Q86UN3 420 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 CCDC36Q8IYA8 594 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 INO80EQ8NBZ0 244 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 OR52N4Q8NGI2 321 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 GPR119Q8TDV5 335 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 WWTR1Q9GZV5 400 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 PIGMQ9H3S5 423 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 ERCC1P07992 297 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 EN2P19622 333 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 FASLGP48023 281 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 CCR5P51681 352 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 AKR1C2P52895 323 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 DCAF7P61962 342 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 AKR1C1Q04828 323 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 INPP5JQ15735 1006 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 GRINAQ7Z429 371 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 ZDHHC22Q8N966 263 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 SLC39A1Q9NY26 324 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 CYB5R1Q9UHQ9 305 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
SLC28A1-201ENST00000286749 IGKV1D-43A0A0B4J1Z2 117 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 NDUFA2O43678 99 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 H2BFMP0C1H6 154 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 GNB3P16520 340 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 ZNF813Q6ZN06 617 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 FOXRED1Q96CU9 486 aaPredicted RBP11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 PTGES2Q9H7Z7 377 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 CD207Q9UJ71 328 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 VCANP13611 3396 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 TLCD2A6NGC4 264 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 PRKACAP17612 351 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 MPZP25189 248 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 EIF1AXP47813 144 aaKnown RBP11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 NSDHLQ15738 373 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 PABPC1L2AQ5JQF8 200 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 OR10Z1Q8NGY1 313 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 FN3KRPQ9HA64 309 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 CLEC1BQ9P126 229 aa11.81□□□□□ -0.52
SLC28A1-201ENST00000286749 C5orf51A6NDU8 294 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 FTCDNL1E5RQL4 147 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 NPIPA5E9PKD4 350 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 MS4A18H0YCH9 400 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 GPR31O00270 319 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ABCD4O14678 606 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 EFSO43281 561 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 FADS1O60427 444 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ATG12O94817 140 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 PMP2P02689 132 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 VSIG8P0DPA2 414 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 OR7A5Q15622 319 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 MS4A18Q3C1V0 323 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ZNF248Q8NDW4 579 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 LMX1AQ8TE12 382 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ASB10Q8WXI3 467 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ADAT3Q96EY9 351 aaPredicted RBP11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 NKX2-4Q9H2Z4 354 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 HPF1Q9NWY4 346 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 PURGQ9UJV8 347 aaKnown RBP11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 NPIPA1Q9UND3 350 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 KCNK7Q9Y2U2 307 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 TO15178 435 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 ZNF208O43345 1280 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 PGAM2P15259 253 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 PNLIPRP2P54317 469 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 QRFPP83859 136 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 SLC29A4Q7RTT9 530 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 OR1M1Q8NGA1 313 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 FOXQ1Q9C009 403 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 CHMP1AQ9HD42 196 aaPredicted RBP11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 MED29Q9NX70 200 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 COPS7AQ9UBW8 275 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 CSAG2Q9Y5P2 127 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 FER1L5A0AVI2 2057 aa11.8□□□□□ -0.52
SLC28A1-201ENST00000286749 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 LILRA5A6NI73 299 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 A6NIZ1 184 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 OR2T1O43869 369 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 SSX5O60225 188 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 TTRP02766 147 aa11.79□□□□□ -0.52
SLC28A1-201ENST00000286749 IFNA6P05013 189 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms