RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 V9GY05 133 aa2.34□□□□□ -2.03
CHD1-201ENST00000284049 LOC110117498-PIK3R3F6TDL0 507 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 PHF1O43189 567 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 RAD51CO43502 376 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 IGHV4-39P01824 125 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 FGF3P11487 239 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 IVDP26440 423 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 RGRP47804 291 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 HLCSP50747 726 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 GTF2A1P52655 376 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 HMGCS1Q01581 520 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 LY6G6FQ5SQ64 297 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 C1orf220Q5T0J3 134 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 ZNF626Q68DY1 528 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OGFOD2Q6N063 350 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 FAM199XQ6PEV8 388 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 NAXDQ8IW45 347 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 TTLQ8NG68 377 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OR1S2Q8NGQ3 325 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 UBA3Q8TBC4 463 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 TEX47Q8TBZ9 253 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 MRGPRDQ8TDS7 321 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 RERGQ96A58 199 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 TMEM159Q96B96 161 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 PAGE5Q96GU1 130 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 TMEM80Q96HE8 168 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 TSNAXQ99598 290 aaKnown RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 EBNA1BP2Q99848 306 aaKnown RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 CLEC7AQ9BXN2 247 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 PRSS22Q9GZN4 317 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OR51B6Q9H340 312 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 ZNF703Q9H7S9 590 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 TREX1Q9NSU2 369 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 IGKV6D-41A0A0C4DH26 115 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 DHRS7CA6NNS2 312 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 M0QZ92 97 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 KCNK1O00180 336 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 PSMD12O00232 456 aaPredicted RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 AQP9O43315 295 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 LYPLA2O95372 231 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 ARG1P05089 322 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 SP1P08047 785 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 STSP08842 583 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 M6PRP20645 277 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 NAB1Q13506 487 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 GOLGA7BQ2TAP0 167 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 HLA-BQ31612 363 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 ZNF66Q6ZN08 573 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 ZNF836Q6ZNA1 936 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 C16orf82Q7Z2V1 217 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OR2W3Q7Z3T1 314 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 MRPL52Q86TS9 123 aaKnown RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 LRRC34Q8IZ02 419 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 LINC01561Q8N1V8 128 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OR2L13Q8N349 312 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 OR8J2Q8NGG1 315 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 APOBEC4Q8WW27 367 aaKnown RBP2.34□□□□□ -2.04
CHD1-201ENST00000284049 MYDGFQ969H8 173 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 HOXD1Q9GZZ0 328 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 NAGKQ9UJ70 344 aa2.34□□□□□ -2.04
CHD1-201ENST00000284049 IGLV9-49A0A0B4J1Y8 123 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 IGHV4-61A0A0C4DH41 118 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 SLC22A20A6NK97 555 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 PDLIM1O00151 329 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OAS1P00973 400 aaKnown RBP2.33□□□□□ -2.04
CHD1-201ENST00000284049 IGLV2-14P01704 120 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 IGHV4-59P01825 116 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 TYMSP04818 313 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 CXCR2P25025 360 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OPRL1P41146 370 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 CSNK1A1P48729 337 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 BNIP2Q12982 314 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 FOXE3Q13461 319 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 SPCS2Q15005 226 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OR2L8Q8NGY9 312 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 NUBPLQ8TB37 319 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 HIST1H4GQ99525 98 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 P2RX4Q99571 388 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 ASB8Q9H765 288 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 C12orf10Q9HB07 376 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 SPANXB1Q9NS25 103 aaPredicted RBP2.33□□□□□ -2.04
CHD1-201ENST00000284049 THYN1Q9P016 225 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 POFUT2Q9Y2G5 429 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 A0A0A6YYD4 124 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 SAGE2PA6NJ88 616 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 RGS5O15539 181 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 STX10O60499 249 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OR7A10O76100 309 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 VAPBO95292 243 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 C1orf105O95561 183 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 PMS2P2O95744 297 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 SERPINE2P07093 398 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OR8U9P0C7N5 309 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 CDK4P11802 303 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 HMGCLP35914 325 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 NSG1P42857 185 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 PSMB2P49721 201 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 RORCP51449 518 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 ADIGQ0VDE8 80 aa2.33□□□□□ -2.04
CHD1-201ENST00000284049 OR2T5Q6IEZ7 315 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms