RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 CD207Q9UJ71 328 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 MMP24Q9Y5R2 645 aa6.85□□□□□ -1.31
TRIM6-201ENST00000278302 C5orf51A6NDU8 294 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CD14P08571 375 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 VAMP1P23763 118 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CDX1P47902 265 aaPredicted RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 SKP1P63208 163 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 BTG2P78543 158 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 FAM53BQ14153 422 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNF239Q16600 458 aaKnown RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNF585AQ6P3V2 769 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 SLC35F2Q8IXU6 374 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 SLC30A7Q8NEW0 376 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 OR6K6Q8NGW6 343 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CMTM3Q96MX0 182 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CNN2Q99439 309 aaKnown RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 G6PC3Q9BUM1 346 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 HAO2Q9NYQ3 351 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 DOK5Q9P104 306 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 LRIT1Q9P2V4 623 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CYP8B1Q9UNU6 501 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 A0A1B0GTH9 108 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 A0A1B0GVT2 93 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNF726A6NNF4 738 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 MCIDASD6RGH6 385 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 LRP3O75074 770 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 FBXO24O75426 580 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 RAB3DO95716 219 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 HCKP08631 526 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 OR8U9P0C7N5 309 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 OR2T7P0C7T2 308 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNF28P17035 718 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 S1PR1P21453 382 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 GAS6Q14393 721 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 SPNS3Q6ZMD2 512 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 CD163Q86VB7 1156 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 SLC35F3Q8IY50 421 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 GABRG1Q8N1C3 465 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 METTL27Q8N6F8 245 aaPredicted RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 C19orf47Q8N9M1 422 aaKnown RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 GATSQ8NAP1 163 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 OR2T27Q8NH04 317 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 OR8U1Q8NH10 309 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ZNRF4Q8WWF5 429 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 JSRP1Q96MG2 331 aaPredicted RBP6.84□□□□□ -1.31
TRIM6-201ENST00000278302 MESP1Q9BRJ9 268 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 TWSG1Q9GZX9 223 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 ADAM18Q9Y3Q7 739 aa6.84□□□□□ -1.31
TRIM6-201ENST00000278302 FAM171A2A8MVW0 826 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 TSTD3H0UI37 97 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 XRCC3O43542 346 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 RAB6AP20340 208 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 SULT1A1P50225 295 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 ZNF84P51523 738 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 CCR4P51679 360 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 ACTA2P62736 377 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 ACTG2P63267 376 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 PPP1R1AQ13522 171 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 EIF2B1Q14232 305 aaKnown RBP6.84□□□□□ -1.32
TRIM6-201ENST00000278302 NKAIN2Q5VXU1 208 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 ZSCAN4Q8NAM6 433 aaPredicted RBP6.84□□□□□ -1.32
TRIM6-201ENST00000278302 CLEC1AQ8NC01 280 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 SLC39A7Q92504 469 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 FOXRED1Q96CU9 486 aaPredicted RBP6.84□□□□□ -1.32
TRIM6-201ENST00000278302 MMABQ96EY8 250 aaPredicted RBP6.84□□□□□ -1.32
TRIM6-201ENST00000278302 NMNAT3Q96T66 252 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 MRPL37Q9BZE1 423 aaKnown RBP6.84□□□□□ -1.32
TRIM6-201ENST00000278302 C1orf198Q9H425 327 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 RGCCQ9H4X1 137 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 SPACA1Q9HBV2 294 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 CHRNA9Q9UGM1 479 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 AMDHD2Q9Y303 409 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 TIMM10BQ9Y5J6 103 aa6.84□□□□□ -1.32
TRIM6-201ENST00000278302 TRAV8-7A0A075B6U6 113 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 SPTY2D1-AS1A0A0U1RR47 76 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.83□□□□□ -1.32
TRIM6-201ENST00000278302 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.83□□□□□ -1.32
TRIM6-201ENST00000278302 BLOC1S5-TXNDC5H3BN57 136 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 PRKNO60260 465 aaPredicted RBP6.83□□□□□ -1.32
TRIM6-201ENST00000278302 MBP02144 154 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 IFI6P09912 130 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 MAOAP21397 527 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 HSD17B7P56937 341 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 KIAA0895LQ68EN5 471 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 RPL22L1Q6P5R6 122 aaKnown RBP6.83□□□□□ -1.32
TRIM6-201ENST00000278302 NPSR1Q6W5P4 371 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 OR4S1Q8NGB4 309 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 OR4C3Q8NH37 302 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 VSTM2LQ96N03 204 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 TAAR9Q96RI9 348 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 ATG5Q9H1Y0 275 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 OR10A5Q9H207 317 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 PARPBPQ9NWS1 579 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 TAS2R8Q9NYW2 309 aa6.83□□□□□ -1.32
TRIM6-201ENST00000278302 ZNF346Q9UL40 294 aaKnown RBP6.83□□□□□ -1.32
TRIM6-201ENST00000278302 SERINC4A6NH21 518 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms