RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 PXKQ7Z7A4 578 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 ZNF485Q8NCK3 441 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 BAHD1Q8TBE0 780 aaPredicted RBP10.27□□□□□ -0.76
SKP2-202ENST00000274255 SLC22A8Q8TCC7 542 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 RAB3CQ96E17 227 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 NICN1Q9BSH3 213 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 LRP12Q9Y561 859 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 KCNMB2Q9Y691 235 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 CELSR3Q9NYQ7 3312 aa10.27□□□□□ -0.76
SKP2-202ENST00000274255 ZNF407Q9C0G0 2248 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 TRBV23-1A0A0A0MS06 115 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 LOC101059948A0A1B0GTJ6 334 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 PLSCR5A0PG75 271 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 OGG1O15527 345 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 EDN3P14138 238 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 SLC17A1Q14916 467 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 C4orf17Q53FE4 359 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 ATPAF1Q5TC12 328 aaPredicted RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 TSPO2Q5TGU0 170 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 HACD4Q5VWC8 232 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 OR2I1PQ8NGU4 316 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 LHFPL5Q8TAF8 219 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 UBALD1Q8TB05 177 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 VOPP1Q96AW1 172 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 NECAB3Q96P71 396 aaPredicted RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 SOSTQ9BQB4 213 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 PITHD1Q9GZP4 211 aaPredicted RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 PLEKHJ1Q9NW61 149 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 MRPS18BQ9Y676 258 aaKnown RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 RALGAPA2Q2PPJ7 1873 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 TRAPPC6AO75865 159 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 RAB5BP61020 215 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 RPS27AP62979 156 aaKnown RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 UBA52P62987 128 aaKnown RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 ELAVL1Q15717 326 aaKnown RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 TMEM176BQ3YBM2 270 aaPredicted RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 TSTD1Q8NFU3 115 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 ANKRD9Q96BM1 317 aaPredicted RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 C4orf45Q96LM5 186 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.27□□□□□ -0.77
SKP2-202ENST00000274255 NXT1Q9UKK6 140 aaKnown RBP10.27□□□□□ -0.77
SKP2-202ENST00000274255 SLC17A4Q9Y2C5 497 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 LOC285556D6RIA3 1793 aa10.27□□□□□ -0.77
SKP2-202ENST00000274255 PCNX1Q96RV3 2341 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 VPS13AQ96RL7 3174 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 FER1L5A0AVI2 2057 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 OR6C76A6NM76 312 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 OR4C45A6NMZ5 311 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 PMS2P2O95744 297 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 NQO2P16083 231 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 RCC1P18754 421 aaPredicted RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 RPS11P62280 158 aaKnown RBP eCLIP10.26□□□□□ -0.77
SKP2-202ENST00000274255 MRPS10P82664 201 aaKnown RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 MGAT2Q10469 447 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 RASGRP3Q8IV61 690 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 OR5M9Q8NGP3 310 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 PRRT1Q99946 306 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 NKX2-4Q9H2Z4 354 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 MRPS28Q9Y2Q9 187 aaKnown RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 FANCMQ8IYD8 2048 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 A0A1W2PR80 420 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 WNT11O96014 354 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 OR1D5P58170 312 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 OR51F2Q8NH61 342 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 FAM213BQ8TBF2 198 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 SDHAF3Q9NRP4 125 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 CA14Q9ULX7 337 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 SLC5A6Q9Y289 635 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 AMDHD2Q9Y303 409 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 MMP24Q9Y5R2 645 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 WDR90Q96KV7 1748 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 A0A0D9SG52 128 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 STMND1H3BQB6 276 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 DBHP09172 617 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 PSMB6P28072 239 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 LIMK1P53667 647 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 INPP5JQ15735 1006 aaPredicted RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 PHF19Q5T6S3 580 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 C1orf140Q5VVS0 124 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 PUSL1Q8N0Z8 303 aaKnown RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 LIN37Q96GY3 246 aaPredicted RBP10.26□□□□□ -0.77
SKP2-202ENST00000274255 GPHA2Q96T91 129 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 STACQ99469 402 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 TMEM59Q9BXS4 323 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 MAGT1Q9H0U3 335 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 WDR13Q9H1Z4 485 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 SFXN1Q9H9B4 322 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 KIF25Q9UIL4 384 aa10.26□□□□□ -0.77
SKP2-202ENST00000274255 CYR61O00622 381 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 C1QL1O75973 258 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 FCGR2AP12318 317 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 GNRHRP30968 328 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 RAET1LQ5VY80 246 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 RGS7BPQ6MZT1 257 aaPredicted RBP10.25□□□□□ -0.77
SKP2-202ENST00000274255 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 ADGRE4PQ86SQ3 457 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 PNPLA2Q96AD5 504 aa10.25□□□□□ -0.77
SKP2-202ENST00000274255 SGK3Q96BR1 496 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms