RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MLF1P58340 268 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 B3GALT5-AS1P59052 145 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 SNRPD2P62316 118 aaKnown RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 INPP5JQ15735 1006 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 LRFN4Q6PJG9 635 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 ZNF680Q8NEM1 530 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 OR2Y1Q8NGV0 311 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 RBP7Q96R05 134 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 SMAD5Q99717 465 aaKnown RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 CNTD2Q9H8S5 307 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.88□□□□□ -0.838e-8■■■□□ 19.1
MSH3-201ENST00000265081 SCGNO76038 276 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 SLC22A5O76082 557 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 BDKRB2P30411 391 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 FOXK1P85037 733 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 ODF4Q2M2E3 257 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 MOGAT2Q3SYC2 334 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 TMPPEQ6ZT21 453 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 OR5AS1Q8N127 324 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 AGBL5Q8NDL9 886 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 OR1M1Q8NGA1 313 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 MAFAQ8NHW3 353 aaPredicted RBP9.88□□□□□ -0.83
MSH3-201ENST00000265081 PHF21AQ96BD5 680 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 UNC13CQ8NB66 2214 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 A0A0C4DFX4 3053 aa9.88□□□□□ -0.83
MSH3-201ENST00000265081 TP53I11O14683 189 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 HLA-GP17693 338 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 ANOS1P23352 680 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 DNASE1P24855 282 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 DSCR4P56555 118 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 RAB12Q6IQ22 244 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 STEAP1BQ6NZ63 245 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 PIGKQ92643 395 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 SPRY4Q9C004 299 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 MRPS18CQ9Y3D5 142 aaKnown RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 TRAV18A0A075B6X5 111 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 CEACAM18A8MTB9 384 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 LEUTXA8MZ59 168 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 ZNF883P0CG24 379 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 MFAP5Q13361 173 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 DEFB126Q9BYW3 111 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 OPN4Q9UHM6 478 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 SLC5A6Q9Y289 635 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 V9GYS6 101 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 PI4KAP42356 2102 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 P2RY10O00398 339 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 SSNA1O43805 119 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 RAMP1O60894 148 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 CER1O95813 267 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 CD3DP04234 171 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 DUSP3P51452 185 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 CLLU1Q5K131 121 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 OPN5Q6U736 354 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 SLC22A24Q8N4F4 322 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 ATG5Q9H1Y0 275 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 TMEM138Q9NPI0 162 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 H3BML4 177 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 IL2RAP01589 272 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 H2BFSP57053 126 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 ZNF121P58317 390 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 ZXDAP98168 799 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 CORO6Q6QEF8 472 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 PMEPA1Q969W9 287 aa9.87□□□□□ -0.83
MSH3-201ENST00000265081 CGGBP1Q9UFW8 167 aaPredicted RBP9.87□□□□□ -0.83
MSH3-201ENST00000265081 CD8AP01732 235 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 IGHEP01854 428 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 CLRN1P58418 232 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 GRB2P62993 217 aaKnown RBP9.86□□□□□ -0.83
MSH3-201ENST00000265081 GINS4Q9BRT9 223 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 EMC6Q9BV81 110 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 ZNF224Q9NZL3 707 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 EIF3KQ9UBQ5 218 aaKnown RBP9.86□□□□□ -0.83
MSH3-201ENST00000265081 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 GDF9O60383 454 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 VSIG8P0DPA2 414 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 CXCL2P19875 107 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 KLK2P20151 261 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 SDHBP21912 280 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 DNASE1L1P49184 302 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 ENDOGQ14249 297 aaKnown RBP9.86□□□□□ -0.83
MSH3-201ENST00000265081 PGAP1Q75T13 922 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 CCDC54Q8NEL0 328 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 OR8B12Q8NGG6 310 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 OR13C8Q8NGS7 320 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 PTGES2Q9H7Z7 377 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 ZNF319Q9P2F9 582 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 A0A0U1RQV5 110 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 VAMP5O95183 116 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 TBPP20226 339 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 RSPO1Q2MKA7 263 aaPredicted RBP9.86□□□□□ -0.83
MSH3-201ENST00000265081 C2orf68Q2NKX9 166 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 ZIC4Q8N9L1 334 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 DTWD2Q8NBA8 298 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 OR52N4Q8NGI2 321 aa9.86□□□□□ -0.83
MSH3-201ENST00000265081 RALGAPA1Q6GYQ0 2036 aa9.85□□□□□ -0.83
MSH3-201ENST00000265081 RAD1O60671 282 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms