RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MAP3K3Q99759 626 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 RGCCQ9H4X1 137 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 GHRLQ9UBU3 117 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 PRODH2Q9UF12 536 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 FLVCR1Q9Y5Y0 555 aa11.1□□□□□ -0.63
CHMP2B-201ENST00000263780 AP4M1O00189 453 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 TO15178 435 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 GPANK1O95872 356 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 GNRH1P01148 92 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 CHRM2P08172 466 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 MFGE8Q08431 387 aaPredicted RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 VAX1Q5SQQ9 334 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 SLC22A24Q8N4F4 322 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 OR51A2Q8NGJ7 313 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF563Q8TA94 476 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 INTS12Q96CB8 462 aaKnown RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 MALSU1Q96EH3 234 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 TOX2Q96NM4 488 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 ABHD6Q9BV23 337 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 METTL8Q9H825 291 aaKnown RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 GPR132Q9UNW8 380 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 LRP12Q9Y561 859 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 NUP210LQ5VU65 1888 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 CEACAM18A8MTB9 384 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 ZNF264O43296 627 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 JTBO76095 146 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 EML2O95834 649 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 IGHV2-5P01817 119 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 GAPDHP04406 335 aaKnown RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 RNH1P13489 461 aaKnown RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 RPL27P61353 136 aaKnown RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 SKP2Q13309 424 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 FAM189A2Q15884 450 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 AKIRIN2Q53H80 203 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 LYPD6Q86Y78 171 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 OR4D6Q8NGJ1 314 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 TAAR8Q969N4 342 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 PPP1R14AQ96A00 147 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 VWCEQ96DN2 955 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 AKR1E2Q96JD6 320 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 VSX1Q9NZR4 365 aaPredicted RBP11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 FBLN5Q9UBX5 448 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 SERGEFQ9UGK8 458 aa11.09□□□□□ -0.63
CHMP2B-201ENST00000263780 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 CLDN4O14493 209 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC16A7O60669 478 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 MT-ATP6P00846 226 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 IFNA17P01571 189 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 PMP2P02689 132 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 RAB5AP20339 215 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 NME2P22392 152 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 CD1CP29017 333 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 CRABP1P29762 137 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 RAB2AP61019 212 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 PSRC1Q6PGN9 363 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 NUBPLQ8TB37 319 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC26A1Q9H2B4 701 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ZDHHC4Q9NPG8 344 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OR5AC2Q9NZP5 309 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OR52A1Q9UKL2 312 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 DMRT1Q9Y5R6 373 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 TRBV23OR9-2A0A075B6M9 112 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 A0A0J9YY10 115 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 TXNL1O43396 289 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 PLGP00747 810 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SERPINA5P05154 406 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 GSTP1P09211 210 aaKnown RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 CXCR1P25024 350 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 FPR2P25090 351 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 LAP3P28838 519 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ACTR1BP42025 376 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 GPR3P46089 330 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ACTR1AP61163 376 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 SSTP61278 116 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 GLO1Q04760 184 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ZNF776Q68DI1 518 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OPN5Q6U736 354 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 CLEC18BQ6UXF7 455 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 GATSQ8NAP1 163 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OR14C36Q8NHC7 312 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 C16orf52Q8NHV5 167 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 ELF4Q99607 663 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 NAA11Q9BSU3 229 aaPredicted RBP11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 BCL2L14Q9BZR8 327 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 OR10A5Q9H207 317 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 PPP4R1LQ9P1A2 415 aa11.08□□□□□ -0.64
CHMP2B-201ENST00000263780 COL4A2P08572 1712 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 IGLV1-36A0A0B4J1U3 117 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 C7orf77A4D0Y5 90 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms