RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 CMC2Q9NRP2 79 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 TAS2R4Q9NYW5 299 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 ZNF207O43670 478 aaKnown RBP15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 HIST1H1CP16403 213 aaKnown RBP15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 PSMB6P28072 239 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 LKAAEAR1Q8TD35 194 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 MZB1Q8WU39 189 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 DUSP13Q9UII6 198 aa15.96■□□□□ 0.15
NOTCH3-201ENST00000263388 TCN2P20062 427 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 ARR3P36575 388 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 OLIG1Q8TAK6 271 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 RLN3Q8WXF3 142 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 EDAQ92838 391 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 RNF24Q9Y225 148 aa15.96■□□□□ 0.14
NOTCH3-201ENST00000263388 ZDBF2Q9HCK1 2354 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ELLP55199 621 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 RPL7L1Q6DKI1 246 aaKnown RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 KIAA1456Q9P272 454 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 FLVCR1Q9Y5Y0 555 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 SMIM18P0DKX4 95 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 HNRNPA3P51991 378 aaKnown RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 RACK1P63244 317 aaKnown RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 RNF212Q495C1 297 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 DOCK8Q8NF50 2099 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 NCBP2LA6PVI3 153 aaKnown RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 DCTN6O00399 190 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ALOX5APP20292 161 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 USF1P22415 310 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 EDDM3AQ14507 147 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF321PQ8N8H1 164 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 OR52I2Q8NH67 350 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 NXPE3Q969Y0 559 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 JAM3Q9BX67 310 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 HRH3Q9Y5N1 445 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 TIGITQ495A1 244 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF573Q86YE8 665 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 SLC38A9Q8NBW4 561 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 FAM71CQ8NEG0 241 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 PIGTQ969N2 578 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 LYRM2Q9NU23 88 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 MED9Q9NWA0 146 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 CGGBP1Q9UFW8 167 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 PARP14Q460N5 1801 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 DHRS4L2Q6PKH6 230 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 OPALINQ96PE5 141 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 DLL4Q9NR61 685 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ACOXLQ9NUZ1 547 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 SNRPGP15A8MWD9 76 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 OTUD1Q5VV17 481 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 UBE2FQ969M7 185 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 BARX1Q9HBU1 254 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 CHST2Q9Y4C5 530 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 PSME4Q14997 1843 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 SERTM2A0A1B0GWG4 89 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 SULT1C4O75897 302 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF485Q8NCK3 441 aa15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 COA3Q9Y2R0 106 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-201ENST00000263388 ZAR1LA6NP61 321 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 GPR12P47775 334 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ACOT6Q3I5F7 207 aaPredicted RBP15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 TMEM52BQ4KMG9 183 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 RPUSD3Q6P087 351 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 CDH26Q8IXH8 852 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 SDF2Q99470 211 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 BANF2Q9H503 90 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 CTSFQ9UBX1 484 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 H7BYZ3 331 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 F10P00742 488 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF749O43361 778 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 NTF3P20783 257 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 TMEM97Q5BJF2 176 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 OR51F2Q8NH61 342 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 TECTBQ96PL2 329 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 MBOAT4Q96T53 435 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ATP13A2Q9NQ11 1180 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 RPS23P62266 143 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 PDZD11Q5EBL8 140 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 FAM26DQ5JW98 314 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 PDXPQ96GD0 296 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 DCAF16Q9NXF7 216 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 PRKRAO75569 313 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 DPTQ07507 201 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF628Q5EBL2 1059 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 NME2P1O60361 137 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ALOX12BO75342 701 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 ALX3O95076 343 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 TM4SF4P48230 202 aa15.94■□□□□ 0.14
NOTCH3-201ENST00000263388 LOC107986453A0A1B0GWG9 222 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 TNFRSF10CO14798 259 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 SOX18P35713 384 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 ZNF90Q03938 601 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 GAREM1Q9H706 876 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 AKR7A3O95154 331 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 CSNK1EP49674 416 aaKnown RBP15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 CAMKMTQ7Z624 323 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 HLA-CQ95604 372 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 ACTR3CQ9C0K3 210 aaPredicted RBP15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.93■□□□□ 0.14
NOTCH3-201ENST00000263388 H0YIG0 161 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms