RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TMEM104Q8NE00 496 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 OR1S2Q8NGQ3 325 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 FBRSQ9HAH7 460 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 UPB1Q9UBR1 384 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 A8MVM7 634 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 C2CD4DB7Z1M9 353 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 KRBOX1C9JBD0 128 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 ADAP1O75689 374 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 STK17BO94768 372 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 MPIG6BO95866 241 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 PGAM2P15259 253 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 FBLP22087 321 aaKnown RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 POLR2HP52434 150 aaKnown RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 ZNF169Q14929 603 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 ELOCQ15369 112 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 RAB12Q6IQ22 244 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 JMJD6Q6NYC1 403 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 MYO7BQ6PIF6 2116 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 OR6K3Q8NGY3 331 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 LIPHQ8WWY8 451 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 MRGPRFQ96AM1 343 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 G6PC2Q9NQR9 355 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SLC39A1Q9NY26 324 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 VSX1Q9NZR4 365 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 GSKIPQ9P0R6 139 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 KCNK7Q9Y2U2 307 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 R4GMQ9 66 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 MS4A18H0YCH9 400 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 AGPAT2O15120 278 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 BCKDHBP21953 392 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SFTPDP35247 375 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 AKR1D1P51857 326 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 SLC26A5P58743 744 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 MS4A18Q3C1V0 323 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 CDCP2Q5VXM1 449 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 FAM166AQ6J272 317 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 C11orf87Q6NUJ2 197 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 DNM1P46Q6ZS02 220 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 HDDC2Q7Z4H3 204 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 PAQR4Q8N4S7 273 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 OR5M8Q8NGP6 311 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 ZC3H10Q96K80 434 aaKnown RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 ZNF304Q9HCX3 659 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 RABL2AQ9UBK7 228 aaPredicted RBP8.14□□□□□ -1.11
MSH4-201ENST00000263187 RABL2BQ9UNT1 228 aa8.14□□□□□ -1.11
MSH4-201ENST00000263187 RAB27BO00194 218 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 PHYHO14832 338 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 SOCS1O15524 211 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ZNF217O75362 1048 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 RPA2P15927 270 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 SLC6A8P48029 635 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 MECP2P51608 486 aaKnown RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 CFHR1Q03591 330 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 TMEM229BQ8NBD8 167 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 OR10H5Q8NGA6 315 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ELP5Q8TE02 316 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 TMED6Q8WW62 240 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ASB17Q8WXJ9 295 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 C11orf40Q8WZ69 217 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 DCUN1D4Q92564 292 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ST6GALNAC5Q9BVH7 336 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 PARP12Q9H0J9 701 aaKnown RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 FN3KRPQ9HA64 309 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ELL3Q9HB65 397 aaPredicted RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 GPN3Q9UHW5 284 aaPredicted RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 CA14Q9ULX7 337 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 PCDHB10Q9UN67 800 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 C5orf63A6NC05 138 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 TLCD2A6NGC4 264 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 DISC1C4P0D8 188 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ALG1L2C9J202 215 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 TSPAN2O60636 221 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 BDKRB2P30411 391 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 SERPINF1P36955 418 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 IKZF1Q13422 519 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ELAVL1Q15717 326 aaKnown RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 OVCH2Q7RTZ1 564 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 NUP54Q7Z3B4 507 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 ABHD12BQ7Z5M8 362 aaPredicted RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 CBLN2Q8IUK8 224 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 INO80EQ8NBZ0 244 aaPredicted RBP8.13□□□□□ -1.11
MSH4-201ENST00000263187 TSTD1Q8NFU3 115 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 MARC2Q969Z3 335 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 SLAMF6Q96DU3 332 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 GPER1Q99527 375 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 C12orf10Q9HB07 376 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 CSAG2Q9Y5P2 127 aa8.13□□□□□ -1.11
MSH4-201ENST00000263187 C9orf170A2RU37 121 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 METTL21EPA6NDL7 271 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 RER1O15258 196 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
MSH4-201ENST00000263187 GLI4P10075 376 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 CD38P28907 300 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 LTBRP36941 435 aa8.12□□□□□ -1.11
MSH4-201ENST00000263187 OR3A4PP47883 348 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms