RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ATXN7O15265 892 aaPredicted RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 UBBP0CG47 229 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 UBCP0CG48 685 aaKnown RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 CD80P33681 288 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 PPT1P50897 306 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 ARMC6Q6NXE6 501 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 NAXDQ8IW45 347 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 EXD3Q8N9H8 876 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 ZSCAN4Q8NAM6 433 aaPredicted RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 TMEM41AQ96HV5 264 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 CCDC163A0A0D9SF12 145 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 A0A1W2PQF6 199 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 PLRG1O43660 514 aaKnown RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 MPIG6BO95866 241 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 ADH1BP00325 375 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 IFNA6P05013 189 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 FHITP49789 147 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 NFATC4Q14934 902 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 MOB3CQ70IA8 216 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 LRRC75AQ8NAA5 344 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 ELSPBP1Q96BH3 223 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 CHMP1AQ9HD42 196 aaPredicted RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 SLC2A4RGQ9NR83 387 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 EMC3Q9P0I2 261 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 CKLFQ9UBR5 152 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 MRPS33Q9Y291 106 aaKnown RBP11.62□□□□□ -0.55
SNX1-201ENST00000261889 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 KCNK7Q9Y2U2 307 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 ETV7Q9Y603 341 aa11.62□□□□□ -0.55
SNX1-201ENST00000261889 DOCK7Q96N67 2140 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ZNF264O43296 627 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 TXNL1O43396 289 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 NDUFA2O43678 99 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 C1QL1O75973 258 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 PMS2P2O95744 297 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ITGA3P26006 1051 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 GPR3P46089 330 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 RAB38P57729 211 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 RPS27AP62979 156 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 UBA52P62987 128 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 CLINT1Q14677 625 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ELOCQ15369 112 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 PABPC1L2AQ5JQF8 200 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 TMEM92Q6UXU6 159 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 OR5AP2Q8NGF4 316 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 FAM71F1Q96KD3 344 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 PELOQ9BRX2 385 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 ELL3Q9HB65 397 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 C5orf63A6NC05 138 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ZNF354AO60765 605 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 ASAH2BP0C7U1 165 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 MUC1P15941 1255 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 KIR2DL1P43626 348 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 GPR85P60893 370 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 SKP2Q13309 424 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 IKZF1Q13422 519 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 INPP5JQ15735 1006 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 WBP2NLQ6ICG8 309 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 DRAM2Q6UX65 266 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ZNF595Q8IYB9 648 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 FOXRED1Q96CU9 486 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 ADAT3Q96EY9 351 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 MRPL48Q96GC5 212 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 OR8B4Q96RC9 309 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 LYRM4Q9HD34 91 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 CLDN16Q9Y5I7 305 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ESPL1Q14674 2120 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 PRR19A6NJB7 356 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 SOCS1O15524 211 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 LRP3O75074 770 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 CTSEP14091 401 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 BCKDHBP21953 392 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 EFNA3P52797 238 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 OR2B8PP59922 312 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 UNC119Q13432 240 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 BRICD5Q6PL45 260 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 CCDC107Q8WV48 283 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 NUDT9Q9BW91 350 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 SYNDIG1Q9H7V2 258 aa11.61□□□□□ -0.55
SNX1-201ENST00000261889 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 RCL1Q9Y2P8 373 aaKnown RBP11.61□□□□□ -0.55
SNX1-201ENST00000261889 A0A0J9YY10 115 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 CD2P06729 351 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 RNH1P13489 461 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 ACTBP60709 375 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 ACTG1P63261 375 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 MRPS10P82664 201 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 SLC35D3Q5M8T2 416 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 OR4K17Q8NGC6 315 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 C14orf79Q96F83 325 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 SLC25A32Q9H2D1 315 aa11.6□□□□□ -0.55
SNX1-201ENST00000261889 METTL8Q9H825 291 aaKnown RBP11.6□□□□□ -0.55
SNX1-201ENST00000261889 NPIPB9F8W1W9 429 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms