RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 TMEM215Q68D42 235 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 KCNE1BA0A087WTH5 132 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 AQP7O14520 342 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 POU3F3P20264 500 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 ALDH3B1P43353 468 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 PDZD9Q8IXQ8 264 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 RDH5Q92781 318 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 A6NIN4 97 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 SPI1P17947 270 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 NR4A2P43354 598 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 OR10A3P58181 314 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 CLEC2AQ6UVW9 174 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 PRSS35Q8N3Z0 413 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 LIN7CQ9NUP9 197 aaKnown RBP12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 ARPC3O15145 178 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 GPX2P18283 190 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 DRD3P35462 400 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 DLX5P56178 289 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 POU4F3Q15319 338 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF385BQ569K4 471 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF574Q6ZN55 896 aaPredicted RBP12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 OR5D13Q8NGL4 314 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 OR4C3Q8NH37 302 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 TAS2R16Q9NYV7 291 aa12.26□□□□□ -0.45
PDGFRB-201ENST00000261799 DVL1O14640 695 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 GPM6AP51674 278 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 NUBP1P53384 320 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 DVL1P1P54792 670 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 CYHR1Q6ZMK1 362 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 LGALS14Q8TCE9 139 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ST8SIA2Q92186 375 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ARL11Q969Q4 196 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ASF1BQ9NVP2 202 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 FBXO34Q9NWN3 711 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 I3L521 148 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 HIST1H1CP16403 213 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ARNTP27540 789 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 DDOSTP39656 456 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SNTB1Q13884 538 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 TBCEQ15813 527 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 DCAF10Q5QP82 559 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 MRGPREQ86SM8 312 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ISL2Q96A47 359 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 CNTNAP3BQ96NU0 1288 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 PLCXD1Q9NUJ7 323 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 TMEM82A0PJX8 343 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 IMPA2O14732 288 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ATP6V1G1O75348 118 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SULT1C4O75897 302 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 MAGEA5P43359 124 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 BPIFB3P59826 476 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 RPS25P62851 125 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 BANF2Q9H503 90 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 WDR54Q9H977 334 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 FBXO8Q9NRD0 319 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ERRFI1Q9UJM3 462 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 KLK4Q9Y5K2 254 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 K7EPK0 472 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 F2RL2O00254 374 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 GMDSO60547 372 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 KLRB1Q12918 225 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 CSRP2Q16527 193 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 FAM71E2Q8N5Q1 922 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 OR52I1Q8NGK6 324 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SAT2Q96F10 170 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 PRELID1Q9Y255 219 aa12.25□□□□□ -0.45
PDGFRB-201ENST00000261799 SHISA8B8ZZ34 492 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 NXPH3O95157 252 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 BRS3P32247 399 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 ACSM1Q08AH1 577 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 IDO2Q6ZQW0 420 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 LGI3Q8N145 548 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 OR52N1Q8NH53 320 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 MOB3AQ96BX8 217 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 C1QTNF3Q9BXJ4 246 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 A0A087WUJ7 227 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 SNRPBP14678 240 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 SRMP19623 302 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 KIR2DL1P43626 348 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 CDC20Q12834 499 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 DPCDQ9BVM2 203 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 RPS10-NUDT3A0A1W2PQS6 291 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 C16orf97H3BN30 126 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 GCAP28676 217 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 CA5AP35218 305 aa12.24□□□□□ -0.45
PDGFRB-201ENST00000261799 SERPINF1P36955 418 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms