RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ZNF718Q3SXZ3 478 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 ANKRD33Q7Z3H0 272 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 NMES1Q9C002 83 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 FLVCR1Q9Y5Y0 555 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SNRPNP63162 240 aaKnown RBP10.99□□□□□ -0.65
COL8A1-201ENST00000261037 Q6ZRG5 221 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 FAM103A1Q9BTL3 118 aaKnown RBP10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SIAEQ9HAT2 523 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 CMC2Q9NRP2 79 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 KIAA1456Q9P272 454 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 A3GALT2U3KPV4 340 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 LRP5LA4QPB2 252 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 AQP7P3A6NL99 342 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 WDR1O75083 606 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 ISL1P61371 349 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM179BQ7Z7N9 219 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 GABRG1Q8N1C3 465 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 FBXL6Q8N531 539 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 NUDCD2Q8WVJ2 157 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 MED18Q9BUE0 208 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 IKZF5Q9H5V7 419 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 KLF13Q9Y2Y9 288 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 AGBL4Q5VU57 503 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM123Q8N131 208 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 OR5M9Q8NGP3 310 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 OR52N5Q8NH56 324 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TRMT61AQ96FX7 289 aaKnown RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 LRFN5Q96NI6 719 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SLC31A2O15432 143 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TBPP20226 339 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 PCBP3P57721 371 aaKnown RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 RPS23P62266 143 aaKnown RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SELENBP1Q13228 472 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SMAD4Q13485 552 aaKnown RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 OXGR1Q96P68 337 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 CHST6Q9GZX3 395 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 PRSS37A4D1T9 235 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 FUCA1P04066 466 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TGM1P22735 817 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 METAP1P53582 386 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 FOXF1Q12946 379 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SLC38A9Q8NBW4 561 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 MARC2Q969Z3 335 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SPNS1Q9H2V7 528 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 NDUFB11Q9NX14 153 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 MN1Q10571 1320 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM129A0AVI4 362 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 DFFBO76075 338 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 HAAOP46952 286 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 C9orf50Q5SZB4 431 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TCTN3Q6NUS6 607 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 Q6ZS52 159 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 CMTM4Q8IZR5 234 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 OR8U1Q8NH10 309 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SLC7A6Q92536 515 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 C14orf79Q96F83 325 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM43Q9BTV4 400 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 SLCO1C1Q9NYB5 712 aa10.98□□□□□ -0.65
COL8A1-201ENST00000261037 KIR2DS1A0A191URI9 304 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 C20orf202A1L168 122 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF724A8MTY0 619 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 KIR2DS4P43632 304 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 PPICP45877 212 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 RFX2P48378 723 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 SUB1P53999 127 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 RPS16P62249 146 aaKnown RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 FOXC1Q12948 553 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 KIR2DS1Q14954 304 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 PRSS36Q5K4E3 855 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CISD2Q8N5K1 135 aaKnown RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ARIH2OSQ8N7S6 290 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 S1PR5Q9H228 398 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 BTBD17A6NE02 478 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM200CA6NKL6 621 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 H0YIG0 161 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 IGLV3-27P01718 113 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 OR5G3P0C626 314 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 OR13C8Q8NGS7 320 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 GABARAPL1Q9H0R8 117 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 AUNIPQ9H7T9 357 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ADAMTS7Q9UKP4 1686 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 ARAP2Q8WZ64 1704 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 A0A087WV62 115 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 TCRBV5S2A0A599 114 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 GPR37O15354 613 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CHRM2P08172 466 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 JUNBP17275 347 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 FABP5Q01469 135 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CD276Q5ZPR3 534 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 LCN15Q6UWW0 184 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 CPEB3Q8NE35 698 aaKnown RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 C2CD4CQ8TF44 421 aa10.97□□□□□ -0.65
COL8A1-201ENST00000261037 MRPS24Q96EL2 167 aaKnown RBP10.97□□□□□ -0.65
COL8A1-201ENST00000261037 SLC25A21Q9BQT8 299 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms