RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 CMBLQ96DG6 245 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 PRRT1Q99946 306 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 FGF21Q9NSA1 209 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 GPN3Q9UHW5 284 aaPredicted RBP13.58□□□□□ -0.23
DDX56-201ENST00000258772 VDAC3Q9Y277 283 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 RALGAPA1Q6GYQ0 2036 aa13.58□□□□□ -0.23
DDX56-201ENST00000258772 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 D6RAR5 112 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 TTRP02766 147 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 GNALP38405 381 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 UNC119Q13432 240 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 RNASE10Q5GAN6 216 aaKnown RBP13.58□□□□□ -0.24
DDX56-201ENST00000258772 TRAPPC6BQ86SZ2 158 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 SLC25A42Q86VD7 318 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 RELL2Q8NC24 303 aaPredicted RBP13.58□□□□□ -0.24
DDX56-201ENST00000258772 APCDD1LQ8NCL9 501 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 C11orf40Q8WZ69 217 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 ST8SIA2Q92186 375 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 FAM46BQ96A09 425 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 EMC6Q9BV81 110 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 SLC25A32Q9H2D1 315 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 SLC22A11Q9NSA0 550 aa13.58□□□□□ -0.24
DDX56-201ENST00000258772 SMAD9O15198 467 aaKnown RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 UBBP0CG47 229 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 LIPCP11150 499 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 ZBTB25P24278 435 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 CSNK1EP49674 416 aaKnown RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 RPS27AP62979 156 aaKnown RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 UBA52P62987 128 aaKnown RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 QRFPP83859 136 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 C3orf33Q6P1S2 294 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 COX15Q7KZN9 410 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 STPG2Q8N412 459 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 GVQW1Q8N7I0 195 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 CADM4Q8NFZ8 388 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 LHFPL5Q8TAF8 219 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 STT3BQ8TCJ2 826 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 DDIT4LQ96D03 193 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 ADAT3Q96EY9 351 aaPredicted RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 PTGES2Q9H7Z7 377 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 GPR160Q9UJ42 338 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 TSPAN4O14817 238 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 ZNF208O43345 1280 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 SYT7O43581 403 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 SLC25A4P12235 298 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 MYF5P13349 255 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 MPZP25189 248 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 EIF1AXP47813 144 aaKnown RBP13.57□□□□□ -0.24
DDX56-201ENST00000258772 TAF13Q15543 124 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 C11orf87Q6NUJ2 197 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 KLHL24Q6TFL4 600 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 KCNRGQ8N5I3 272 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 OR10H5Q8NGA6 315 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 ST8SIA4Q92187 359 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 MRGPRFQ96AM1 343 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 SEC22AQ96IW7 307 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 PDCD10Q9BUL8 212 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 PBOV1Q9GZY1 135 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 CYB5R1Q9UHQ9 305 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 TNFSF18Q9UNG2 199 aa13.57□□□□□ -0.24
DDX56-201ENST00000258772 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 LOC100509620A0A075B734 347 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 LIPT2A6NK58 231 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 CCSO14618 274 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 BPNT1O95861 308 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 VSIG8P0DPA2 414 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 HLA-GP17693 338 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SUMO3P55854 103 aaPredicted RBP13.56□□□□□ -0.24
DDX56-201ENST00000258772 BIDP55957 195 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 FOXF1Q12946 379 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SLC22A6Q4U2R8 563 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 OR52W1Q6IF63 320 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 JMJD6Q6NYC1 403 aaPredicted RBP13.56□□□□□ -0.24
DDX56-201ENST00000258772 LYG2Q86SG7 212 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SLC22A24Q8N4F4 322 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 PXT1Q8NFP0 134 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 UQCC2Q9BRT2 126 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 TGIF2Q9GZN2 237 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 MS4A7Q9GZW8 240 aaPredicted RBP13.56□□□□□ -0.24
DDX56-201ENST00000258772 CST11Q9H112 138 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 TMEM185BQ9H7F4 350 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 COMMD9Q9P000 198 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 GLS2Q9UI32 602 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 LAMA1P25391 3075 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SPEGQ15772 3267 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 VSTM2BA6NLU5 285 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 SHISA8B8ZZ34 492 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 H3BML4 177 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 OR2F2O95006 317 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 PPP1R1AQ13522 171 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 OR2F1Q13607 317 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 ZNF345Q14585 488 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 ZDHHC22Q8N966 263 aa13.56□□□□□ -0.24
DDX56-201ENST00000258772 ZBTB44Q8NCP5 570 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms