RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PCDH7O60245 1069 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 LRP3O75074 770 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 C8AP07357 584 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 KCNE1P15382 129 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 SRP14P37108 136 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DAPP51397 102 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 CDKN2DP55273 166 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ODF1Q14990 250 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ARSIQ5FYB1 569 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 SGPP2Q8IWX5 399 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ZBTB2Q8N680 514 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ZBTB34Q8NCN2 500 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 FCRL5Q96RD9 977 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 NSUN3Q9H649 340 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 C1orf123Q9NWV4 160 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 TUBD1Q9UJT1 453 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF346Q9UL40 294 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 USP22Q9UPT9 525 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 RBFOX2O43251 390 aaKnown RBP eCLIP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR137BO60478 399 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ALOX12BO75342 701 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 OR7C1O76099 320 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4F21O95013 312 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DBHP09172 617 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 EPORP19235 508 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 POU3F2P20265 443 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 CX3CR1P49238 355 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 AGTR2P50052 363 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DGKEP52429 567 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 CRYBA4P53673 196 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 HBA1P69905 142 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DGCR2P98153 550 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 RBPJQ06330 500 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 GPNMBQ14956 572 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 CPZQ66K79 652 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4F3Q6IEY1 312 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4P4Q8NGL7 312 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 POM121L2Q96KW2 1035 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DIRC2Q96SL1 478 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 C16orf70Q9BSU1 422 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 MSL2Q9HCI7 577 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM100Q9NV29 134 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 MRPS33Q9Y291 106 aaKnown RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 TMEM269A0A1B0GVZ9 245 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3HP0C7X1 549 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 FOLR1P15328 257 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 GOT1P17174 413 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 UCP1P25874 307 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 AOAHP28039 575 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 GALR1P47211 349 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 DIO3P55073 304 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 LILRA4P59901 499 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 PRTGQ2VWP7 1150 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 ELFN2Q5R3F8 820 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 RHEBL1Q8TAI7 183 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 MRGPRX1Q96LB2 322 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR21Q99679 349 aa6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 NKX3-1Q99801 234 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 SDR39U1Q9NRG7 319 aaPredicted RBP6.15□□□□□ -1.42
PDGFRA-201ENST00000257290 HS3ST1O14792 307 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SUOXP51687 545 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC7A9P82251 487 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 RNFT1Q5M7Z0 435 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 GDF6Q6KF10 455 aaPredicted RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 CNTN4Q8IWV2 1026 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 NANOS1Q8WY41 292 aaKnown RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST1H2AAQ96QV6 131 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 PARP12Q9H0J9 701 aaKnown RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 PGPEP1Q9NXJ5 209 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 MTCH2Q9Y6C9 303 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 PPBPP02775 128 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 LAMP1P11279 417 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ATF1P18846 271 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 GPX3P22352 226 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 CEACAM8P31997 349 aaPredicted RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 PBX3P40426 434 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 AMTP48728 403 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM3BP58499 235 aaPredicted RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF345Q14585 488 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 C1orf194Q5T5A4 169 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF626Q68DY1 528 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SERPINA11Q86U17 422 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 PPP1R1CQ8WVI7 109 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SYT11Q9BT88 431 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ASIC5Q9NY37 505 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 VPS29Q9UBQ0 182 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC7A7Q9UM01 511 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 WSB1Q9Y6I7 421 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 C4orf47A7E2U8 309 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 M0R082 166 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 XRCC2O43543 280 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 SNCGO76070 127 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 HLA-DQA2P01906 255 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 ACP2P11117 423 aa6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 MUC1P15941 1255 aaPredicted RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST1H1CP16403 213 aaKnown RBP6.15□□□□□ -1.43
PDGFRA-201ENST00000257290 EPHA8P29322 1005 aaPredicted RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms