RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZNF121P58317 390 aaPredicted RBP7.9□□□□□ -1.15
PTCD3-201ENST00000254630 ACSM5Q6NUN0 579 aa7.9□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM182Q6ZP80 229 aaPredicted RBP7.9□□□□□ -1.15
PTCD3-201ENST00000254630 SSX9Q7RTT3 188 aa7.9□□□□□ -1.15
PTCD3-201ENST00000254630 UBE2FQ969M7 185 aa7.9□□□□□ -1.15
PTCD3-201ENST00000254630 ONECUT1Q9UBC0 465 aa7.9□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF705GA8MUZ8 300 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 LMO7DNF2Z398 122 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CCSO14618 274 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 TRAF3IP2O43734 574 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CRYAAP02489 173 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ADH4P08319 380 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 APEX1P27695 318 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 NOVA1P51513 510 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 B4GALNT1Q00973 533 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 INSM1Q01101 510 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SHBQ15464 509 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 DEFB124Q8NES8 71 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 HDGFL3Q9Y3E1 203 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 QSER1Q2KHR3 1735 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 IGHV3-64DA0A0J9YX35 117 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF816-ZNF321PA0A0X1KG74 233 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 B4GALT3O60512 393 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF26P17031 533 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SDHBP21912 280 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CTGFP29279 349 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ARRB2P32121 409 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RPS19P39019 145 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 DIO1P49895 249 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 PPT1P50897 306 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CCR9P51686 369 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 TESK1Q15569 626 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 LIPNQ5VXI9 398 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 FBXL14Q8N1E6 418 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF321PQ8N8H1 164 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ANKRD53Q8N9V6 530 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SLC30A7Q8NEW0 376 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ARHGDIGQ99819 225 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 GON7Q9BXV9 100 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ARV1Q9H2C2 271 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SCPEP1Q9HB40 452 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SPACA1Q9HBV2 294 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 MED29Q9NX70 200 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 QPCTLQ9NXS2 382 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 FABP7O15540 132 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SSSCA1O60232 199 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 FZD6O60353 706 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RAF1P04049 648 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 B4GALT1P15291 398 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CDAP32320 146 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 UBE2IP63279 158 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 AGERQ15109 404 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF718Q3SXZ3 478 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 C1orf210Q8IVY1 113 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR52N5Q8NH56 324 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 PKMYT1Q99640 499 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 C19orf43Q9BQ61 176 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 TAS2R5Q9NYW4 299 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 KLK10O43240 276 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 HLA-HP01893 362 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 NME1P15531 152 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 DTYMKP23919 212 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 HPSE2Q8WWQ2 592 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SPACA9Q96E40 222 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 HES7Q9BYE0 225 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 HINT3Q9NQE9 182 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 WNT16Q9UBV4 365 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SLC23A1Q9UHI7 598 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 MN1Q10571 1320 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 METTL15P1P0C7V9 234 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ATF1P18846 271 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SLC17A1Q14916 467 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR2B11Q5JQS5 317 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR2A2Q6IF42 318 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR10K2Q6IF99 312 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 DBX2Q6ZNG2 339 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR13C5Q8NGS8 318 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ARSGQ96EG1 525 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SLC25A21Q9BQT8 299 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 BCL2L10Q9HD36 194 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 SLCO1C1Q9NYB5 712 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OSGIN2Q9Y236 505 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 TRGV5A0A0B4J1U4 118 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 CRYM-AS1A6NIL9 109 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 MBTPS2O43462 519 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 ALOX5APP20292 161 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RPS10P46783 165 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 GABRA4P48169 554 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 GPM6AP51674 278 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 METAP1P53582 386 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RPS16P62249 146 aaKnown RBP7.89□□□□□ -1.15
PTCD3-201ENST00000254630 FCN2Q15485 313 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM200AQ86VY9 491 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 RIMKLAQ8IXN7 391 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 FAM26EQ8N5C1 309 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 OR52H1Q8NGJ2 320 aa7.89□□□□□ -1.15
PTCD3-201ENST00000254630 GINS3Q9BRX5 216 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms