RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 IGLV1-36A0A0B4J1U3 117 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 LOC101059948A0A1B0GTJ6 334 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 KRBOX1C9JBD0 128 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 KCNAB3O43448 404 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 IGKV3-11P04433 115 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 GLULP15104 373 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 C17orf67Q0P5P2 114 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 ATPAF1Q5TC12 328 aaPredicted RBP16.5■□□□□ 0.23
LRP3-201ENST00000253193 CATSPERDQ86XM0 798 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 UEVLDQ8IX04 471 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 CDH26Q8IXH8 852 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 ST6GALNAC5Q9BVH7 336 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 CRTAPO75718 401 aaPredicted RBP16.5■□□□□ 0.23
LRP3-201ENST00000253193 HTR3BO95264 441 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 ARHGEF39Q8N4T4 335 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 PXT1Q8NFP0 134 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 NPAS1Q99742 590 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 C1orf198Q9H425 327 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 FAM186AA6NE01 2351 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 ZNF208O43345 1280 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 ZNF93P35789 620 aaPredicted RBP16.5■□□□□ 0.23
LRP3-201ENST00000253193 FOXF1Q12946 379 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 MEF2DQ14814 521 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 SLC9A3R2Q15599 337 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 TMEM229BQ8NBD8 167 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 C11orf40Q8WZ69 217 aa16.5■□□□□ 0.23
LRP3-201ENST00000253193 HSPB2A8KAH6 182 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 HMSDA8MTL9 139 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 HSPB2Q16082 182 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 OR4K17Q8NGC6 315 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 ASF1BQ9NVP2 202 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 RAB22AQ9UL26 194 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 METTL12A8MUP2 240 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 UBCP0CG48 685 aaKnown RBP16.49■□□□□ 0.23
LRP3-201ENST00000253193 SCAND1P57086 179 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 OR1S1Q8NH92 325 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 PRMT8Q9NR22 394 aaPredicted RBP16.49■□□□□ 0.23
LRP3-201ENST00000253193 IGHV1OR21-1A0A087WYE8 117 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 RFPL4AA6NLU0 287 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 RFPL4AL1F8VTS6 287 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 TSPAN2O60636 221 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 ERCC1P07992 297 aaPredicted RBP16.49■□□□□ 0.23
LRP3-201ENST00000253193 PGAM2P15259 253 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 ABOP16442 354 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 CHAF1BQ13112 559 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 PRAMEF20Q5VT98 475 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 DCUN1D4Q92564 292 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 ZNF75AQ96N20 296 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 FOXQ1Q9C009 403 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 SCPEP1Q9HB40 452 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 SLC39A1Q9NY26 324 aa16.49■□□□□ 0.23
LRP3-201ENST00000253193 D6RAR5 112 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 BET1O15155 118 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 NPY4RP50391 375 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 EPHA4P54764 986 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 PPP1R1AQ13522 171 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 SLC22A24Q8N4F4 322 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 BVESQ8NE79 360 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 OR4K15Q8NH41 348 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 MVB12AQ96EY5 273 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 SLCO5A1Q9H2Y9 848 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 ASH2LQ9UBL3 628 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 GDF2Q9UK05 429 aaPredicted RBP16.48■□□□□ 0.23
LRP3-201ENST00000253193 HRH3Q9Y5N1 445 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 F5H5K5 113 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 DXOO77932 396 aaKnown RBP16.48■□□□□ 0.23
LRP3-201ENST00000253193 S100A10P60903 97 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 ZNF660Q6AZW8 331 aaPredicted RBP16.48■□□□□ 0.23
LRP3-201ENST00000253193 SYT13Q7L8C5 426 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 ZSCAN1Q8NBB4 408 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 FOXRED1Q96CU9 486 aaPredicted RBP16.48■□□□□ 0.23
LRP3-201ENST00000253193 SLC6A15Q9H2J7 730 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 EML5Q05BV3 1969 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 A8MXK9 166 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 ZNF43P17038 809 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 LTBRP36941 435 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 ATP1B3P54709 279 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
LRP3-201ENST00000253193 GLIPR1L1Q6UWM5 242 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 FAM57BQ71RH2 274 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 BIVMQ86UB2 503 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 OR1M1Q8NGA1 313 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 PBOV1Q9GZY1 135 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 CHST11Q9NPF2 352 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 KLK13Q9UKR3 277 aa16.48■□□□□ 0.23
LRP3-201ENST00000253193 A0A0D9SG52 128 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 FAM74A7A6NL05 159 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 GALNSP34059 522 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 FAM74A3Q4VXF1 159 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 ZNF519Q8TB69 540 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 SLC25A28Q96A46 364 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 ZNF775Q96BV0 537 aaPredicted RBP16.47■□□□□ 0.23
LRP3-201ENST00000253193 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 CST11Q9H112 138 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 TICRRQ7Z2Z1 1910 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 TMEM176BQ3YBM2 270 aaPredicted RBP16.47■□□□□ 0.23
LRP3-201ENST00000253193 FAM219AQ8IW50 185 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 NKAIN3Q8N8D7 197 aa16.47■□□□□ 0.23
LRP3-201ENST00000253193 MARCH1Q8TCQ1 289 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms