RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 COMMD4Q9H0A8 199 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 ENPP5Q9UJA9 477 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 SF3B6Q9Y3B4 125 aaKnown RBP11.29□□□□□ -0.6
LSM8-201ENST00000249299 SHANK1Q9Y566 2161 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
LSM8-201ENST00000249299 PHF3Q92576 2039 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 A0A096LPE4 126 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 TRDV1A0A1B0GX56 115 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 EEF1E1-BLOC1S5C9J1V9 151 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 E9PI62 339 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 LOC110117498-PIK3R3F6TDL0 507 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 C16orf97H3BN30 126 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 ICMTO60725 284 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 NOL3O60936 208 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 GATBO75879 557 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 LYZL6O75951 148 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 UBCP0CG48 685 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 GDI2P50395 445 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 ASCL1P50553 236 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 MRPL49Q13405 166 aaKnown RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 C9orf135Q5VTT2 229 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 TMEM244Q5VVB8 128 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 C1orf174Q8IYL3 243 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 RELL2Q8NC24 303 aaPredicted RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 OR1J2Q8NGS2 313 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 HSD17B8Q92506 261 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 GHSRQ92847 366 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 PGLYRP3Q96LB9 341 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 RGCCQ9H4X1 137 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 FAM206AQ9NX38 181 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 FRRS1LQ9P0K9 344 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 ERRFI1Q9UJM3 462 aaPredicted RBP11.28□□□□□ -0.6
LSM8-201ENST00000249299 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 ZGRF1Q86YA3 2104 aa11.28□□□□□ -0.6
LSM8-201ENST00000249299 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 A0A0U1RQV5 110 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 J3QL48 77 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 M0R135 149 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 PSMD9O00233 223 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 MAGEB4O15481 346 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 RAD51DO75771 328 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 SC5DO75845 299 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 HLA-HP01893 362 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 CD79AP11912 226 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ZNF12P17014 697 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 TUBG1P23258 451 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 CRYBB2P43320 205 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 HTR5AP47898 357 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 DOC2BQ14184 412 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 HIKESHIQ53FT3 197 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 GPR107Q5VW38 600 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 OTPQ5XKR4 325 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ZNF774Q6NX45 483 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 XKRXQ6PP77 449 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ARL9Q6T311 187 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 UNQ6126/PRO20091Q6UXV3 157 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 COLCA1Q6ZS62 124 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 PRSS45Q7RTY3 260 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 CLVS1Q8IUQ0 354 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 LIX1LQ8IVB5 337 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ELMOD2Q8IZ81 293 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ZNF808Q8N4W9 903 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 WDR31Q8NA23 367 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 OR5AK2Q8NH90 309 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 FGFBP3Q8TAT2 258 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 HTRA1Q92743 480 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 MUCL1Q96DR8 90 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ZNF799Q96GE5 643 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 ZNF75AQ96N20 296 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 G6PC2Q9NQR9 355 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 TUBG2Q9NRH3 451 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 RSL24D1Q9UHA3 163 aaKnown RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 OR52A1Q9UKL2 312 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 GSTK1Q9Y2Q3 226 aa11.27□□□□□ -0.61
LSM8-201ENST00000249299 SIRT4Q9Y6E7 314 aaPredicted RBP11.27□□□□□ -0.61
LSM8-201ENST00000249299 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 H3BSA7 217 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 SLC22A1O15245 554 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 AIREO43918 545 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 RPP14O95059 124 aaKnown RBP11.26□□□□□ -0.61
LSM8-201ENST00000249299 ZFPL1O95159 310 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 PNPP00491 289 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
LSM8-201ENST00000249299 RAF1P04049 648 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms