RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 UBQLN4Q9NRR5 601 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 RPL18Q07020 188 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZC3HAV1LQ96H79 300 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 PRSS16Q9NQE7 514 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 AURKAIP1Q9NWT8 199 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 MN1Q10571 1320 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 GPR37O15354 613 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 AK1P00568 194 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 AGFG1P52594 562 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF429Q86V71 674 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 OR4D9Q8NGE8 314 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 OR56B1Q8NGI3 324 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TRPM6Q9BX84 2022 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TIMM8AO60220 97 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 BMPR1AP36894 532 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 C11orf42Q8N5U0 333 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TANKQ92844 425 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 MARCH5Q9NX47 278 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 GNG12Q9UBI6 72 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 FAM166BA8MTA8 275 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 H0YIV9 168 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TCAPO15273 167 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 IGHV3-7P01780 117 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 DPY19L2P2Q6ZN68 376 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF620Q6ZNG0 422 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 C8orf44Q96CB5 159 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 OR5V1Q9UGF6 321 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 RNF24Q9Y225 148 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF320A2RRD8 509 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 GABRA4P48169 554 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 RAB31Q13636 194 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 CNN3Q15417 329 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ASB17Q8WXJ9 295 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 DUSP13Q9UII6 198 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 BCAT2O15382 392 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 CR2P20023 1033 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 C5AR1P21730 350 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 KCNJ3P48549 501 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF816Q0VGE8 651 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF684Q5T5D7 378 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TSPO2Q5TGU0 170 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 RBMXL3Q8N7X1 1067 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 CLEC1AQ8NC01 280 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 NUBPLQ8TB37 319 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 PPP1R1CQ8WVI7 109 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 FAM155AB1AL88 458 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF587BE7ETH6 402 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 IGHG1P01857 330 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 HOXB3P14651 431 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 TAS2R46P59540 309 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 LSM11P83369 360 aaKnown RBP eCLIP6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF566Q969W8 418 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 ZNF707Q96C28 371 aaPredicted RBP6.84□□□□□ -1.31
RIF1-201ENST00000243326 C1orf198Q9H425 327 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 INPP5EQ9NRR6 644 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 MED29Q9NX70 200 aa6.84□□□□□ -1.31
RIF1-201ENST00000243326 TRAF3IP2O43734 574 aaPredicted RBP6.84□□□□□ -1.32
RIF1-201ENST00000243326 ATF1P18846 271 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 DPP4P27487 766 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 CHRNA7P36544 502 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 CUTCQ9NTM9 273 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 GPR160Q9UJ42 338 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 RPL12P30050 165 aaKnown RBP6.84□□□□□ -1.32
RIF1-201ENST00000243326 CCDC190Q86UF4 302 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 C10orf111Q8N326 155 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 CHAC2Q8WUX2 184 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 LMF2Q9BU23 707 aaKnown RBP6.84□□□□□ -1.32
RIF1-201ENST00000243326 PRELID3BQ9Y3B1 194 aa6.84□□□□□ -1.32
RIF1-201ENST00000243326 AKAP11Q9UKA4 1901 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 TK1P04183 234 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 HOXB9P17482 250 aaPredicted RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 DUSP1P28562 367 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 PCBP4P57723 403 aaKnown RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 SPATA46Q5T0L3 261 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 STAC2Q6ZMT1 411 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 P2RY12Q9H244 342 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 GNB4Q9HAV0 340 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 SIRT3Q9NTG7 399 aaPredicted RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 ICOSLGO75144 302 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 GLRA1P23415 457 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 TCL1AP56279 114 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 ZNF90Q03938 601 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 SLC16A14Q7RTX9 510 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 EMG1Q92979 244 aaKnown RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 FLVCR1Q9Y5Y0 555 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 SLC37A1P57057 533 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 TCTN1Q2MV58 587 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 NAXDQ8IW45 347 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 OR1M1Q8NGA1 313 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 ZNF296Q8WUU4 475 aaPredicted RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 ZCCHC4Q9H5U6 513 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 A4GNTQ9UNA3 340 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 SLC5A6Q9Y289 635 aa6.83□□□□□ -1.32
RIF1-201ENST00000243326 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.83□□□□□ -1.32
RIF1-201ENST00000243326 A0A1W2PRD5 423 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms