RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CLEC2DQ9UHP7 191 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 EXOGQ9Y2C4 368 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 NOP16Q9Y3C1 178 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 A6NLC8 198 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF879B4DU55 563 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ARL6IP5O75915 188 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 HCKP08631 526 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ETV1P50549 477 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 SLC35A2P78381 396 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ALKBH1Q13686 389 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF362Q5T0B9 420 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CPNE2Q96FN4 548 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 PLPPR2Q96GM1 343 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CHCHD6Q9BRQ6 235 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF696Q9H7X3 374 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 PTTG3PQ9NZH4 202 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 R4GMQ9 66 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CCDC182A6NF36 153 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 TMEM212A6NML5 194 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CCRL2O00421 344 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CD36P16671 472 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 MZT1Q08AG7 82 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 CARTPTQ16568 116 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 SPATA46Q5T0L3 261 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 FBXO17Q96EF6 278 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 MS4A3Q96HJ5 214 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 SIGLEC11Q96RL6 698 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 DMDP11532 3685 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 UBCP0CG48 685 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 DYNC1I2Q13409 638 aaKnown RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 TBCEQ15813 527 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 TEX30Q5JUR7 227 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 LINC01590Q5TEZ4 76 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 RELL2Q8NC24 303 aaPredicted RBP9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 PLGRKTQ9HBL7 147 aa9.72□□□□□ -0.85
TNFAIP3-201ENST00000237289 TMEM129A0AVI4 362 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 P2RY10O00398 339 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 SPARTQ8N0X7 666 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 PIGCQ92535 297 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 DOK1Q99704 481 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 PAPOLGQ9BWT3 736 aaKnown RBP9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 DUSP21Q9H596 190 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 LHFPL6Q9Y693 200 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 PMF1-BGLAPU3KQ54 211 aa9.71□□□□□ -0.85
TNFAIP3-201ENST00000237289 AGAP20933 346 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 ADORA2A-AS1P86434 159 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 GGTLC2Q14390 218 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 PNLDC1Q8NA58 520 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 BHLHE23Q8NDY6 225 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 VRK1Q99986 396 aaPredicted RBP9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 PBOV1Q9GZY1 135 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 ETAA1Q9NY74 926 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 NDUFA13Q9P0J0 144 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 PSMA6P60900 246 aaKnown RBP9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 PPP1CBP62140 327 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 GPR107Q5VW38 600 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 CFAP77Q6ZQR2 320 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 RNF115Q9Y4L5 304 aa9.71□□□□□ -0.86
TNFAIP3-201ENST00000237289 AIREO43918 545 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 GPRIN2O60269 458 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 GATBO75879 557 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 NTF4P34130 210 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 EMX1Q04741 257 aaPredicted RBP9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ENDOGQ14249 297 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 KCNMB1Q16558 191 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ADAM5Q6NVV9 412 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR5AS1Q8N127 324 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 NANOGP1Q8N7R0 232 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 REEP6Q96HR9 211 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 CEP19Q96LK0 163 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 RHNO1Q9BSD3 238 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 COPS3Q9UNS2 423 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF281Q9Y2X9 895 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 INMTO95050 263 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 IRF2P14316 349 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 SOX6P35712 828 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 RIPPLY1Q0D2K3 151 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 HIST3H3Q16695 136 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 C1QTNF12Q5T7M4 302 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 CEACAM19Q7Z692 300 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ZNF671Q8TAW3 534 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 SYNPRQ8TBG9 265 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 OR51E1Q8TCB6 317 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 WFIKKN1Q96NZ8 548 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 RGCCQ9H4X1 137 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 OPA3Q9H6K4 179 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 ACOT13Q9NPJ3 140 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 CPAMD8Q8IZJ3 1885 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 hCG_1807616A0A1W2PRN6 198 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 DBHP09172 617 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 SNRPD2P62316 118 aaKnown RBP9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 MICU1Q9BPX6 476 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 WNT5BQ9H1J7 359 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 TMEM165Q9HC07 324 aa9.7□□□□□ -0.86
TNFAIP3-201ENST00000237289 A0A1W2PPK0 400 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms