RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NCMAPQ5T1S8 102 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ADAMTSL4Q6UY14 1074 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 PIGTQ969N2 578 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 SLC23A2Q9UGH3 650 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 SLC22A13Q9Y226 551 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 C7orf66A4D0T2 115 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ANKRD30BLA7E2S9 258 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF217O75362 1048 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 MPC2O95563 127 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 KCNJ3P48549 501 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 RAE1P78406 368 aaKnown RBP12.55□□□□□ -0.4
HCFC2-201ENST00000229330 MFAP5Q13361 173 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 OR4S1Q8NGB4 309 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF586Q9NXT0 402 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ABCA3Q99758 1704 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.55□□□□□ -0.4
HCFC2-201ENST00000229330 RAB5AP20339 215 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ABCD3P28288 659 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 SLC35A1P78382 337 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 DTWD2Q8NBA8 298 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 ARRDC3Q96B67 414 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 CCNL2Q96S94 520 aaPredicted RBP12.55□□□□□ -0.4
HCFC2-201ENST00000229330 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 EDEM2Q9BV94 578 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 OR5V1Q9UGF6 321 aa12.55□□□□□ -0.4
HCFC2-201ENST00000229330 A0A1W2PPH5 198 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 TCAPO15273 167 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 GALR3O60755 368 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 IGF2P01344 180 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ACKR3P25106 362 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF528Q3MIS6 628 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 GLI4P10075 376 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 EN2P19622 333 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 VAMP3Q15836 100 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 USP53Q70EK8 1073 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 OPN4Q9UHM6 478 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 V9GYS6 101 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 HCRTR1O43613 425 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 TLE1Q04724 770 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF684Q5T5D7 378 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 ULBP2Q9BZM5 246 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 SLC35B3Q9H1N7 401 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 KIR2DS5A0A0G2JLQ3 304 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 A0A0G2JNG1 304 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 KIR2DS3K7RE56 304 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 THBS3P49746 956 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 CATR1Q13166 79 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 KIR2DS5Q14953 304 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 MR1Q95460 341 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
HCFC2-201ENST00000229330 PELI1Q96FA3 418 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 C19orf43Q9BQ61 176 aa12.54□□□□□ -0.4
HCFC2-201ENST00000229330 A0A1W2PPQ1 181 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 A8MVM7 634 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 MSX1P28360 303 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 IRS1P35568 1242 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 RPS27P42677 84 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 MAT1AQ00266 395 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 SIGLECL1Q8N7X8 197 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 RPUSD4Q96CM3 377 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 GPR160Q9UJ42 338 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF346Q9UL40 294 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 POMT1Q9Y6A1 747 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 LOC105371267A0A1B0GV96 52 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 LY86O95711 162 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 GJA4P35212 333 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF85Q03923 595 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 PPP1R1AQ13522 171 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 PLXDC1Q8IUK5 500 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 OR51A2Q8NGJ7 313 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 ZNF426Q9BUY5 554 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 IKZF1Q13422 519 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 SLC38A9Q8NBW4 561 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 MYEOVQ96EZ4 313 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 SAT2Q96F10 170 aaPredicted RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 EVPLQ92817 2033 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 FZD6O60353 706 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 INPP5JQ15735 1006 aaPredicted RBP12.53□□□□□ -0.4
HCFC2-201ENST00000229330 VWA2Q5GFL6 755 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 DOK3Q7L591 496 aa12.53□□□□□ -0.4
HCFC2-201ENST00000229330 TMPRSS7Q7RTY8 843 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms