RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SSX5O60225 188 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ZNF217O75362 1048 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 CRHP06850 196 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 PI3P19957 117 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ANOS1P23352 680 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 BLOC1S1P78537 153 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 HSPB2Q16082 182 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 C1orf100Q5SVJ3 147 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 DCXRQ7Z4W1 244 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ZFP82Q8N141 532 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 SVBPQ8N300 66 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 DCUN1D4Q92564 292 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 PHB2Q99623 299 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 PRRT1Q99946 306 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 CMSS1Q9BQ75 279 aaKnown RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 CHMP1AQ9HD42 196 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 SLC2A8Q9NY64 477 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 VSX1Q9NZR4 365 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 PRODH2Q9UF12 536 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 NDRG3Q9UGV2 375 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 OR52A1Q9UKL2 312 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 HHLA2Q9UM44 414 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 TMEM269A0A1B0GVZ9 245 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 LOC390937A0A1W2PQ73 354 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 RAB19A4D1S5 217 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ADAP1O75689 374 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 NSA2O95478 260 aaKnown RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 FAM157CP0CG43 387 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 CD79AP11912 226 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 PSMB6P28072 239 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 KCNJ3P48549 501 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ARRB1P49407 418 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 QRFPP83859 136 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 CCINQ13939 588 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 SGCBQ16585 318 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 MST1LQ2TV78 715 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 DMRTC1Q5HYR2 192 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ARMC6Q6NXE6 501 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 H3F3CQ6NXT2 135 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 KCTD18Q6PI47 426 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 UQCC3Q6UW78 93 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 OR4K17Q8NGC6 315 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ADIPOR1Q96A54 375 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ZNF775Q96BV0 537 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 ADAT3Q96EY9 351 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 CPNE2Q96FN4 548 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 LAT2Q9GZY6 243 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 TXNIPQ9H3M7 391 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ACKR4Q9NPB9 350 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 COA4Q9NYJ1 87 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 ZNF629Q9UEG4 869 aaPredicted RBP11.07□□□□□ -0.64
NUP88-201ENST00000225696 R4GMQ9 66 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 CPAMD8Q8IZJ3 1885 aa11.07□□□□□ -0.64
NUP88-201ENST00000225696 FAM221BA6H8Z2 402 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 DBX1A6NMT0 343 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 F8VVB4 439 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 F8VWA3 439 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 TNFP01375 233 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 PVALBP20472 110 aaPredicted RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 CD1CP29017 333 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 OR1D4P47884 311 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 HOXA1P49639 335 aaPredicted RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 HSD17B7P56937 341 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 FOXL2P58012 376 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 MEF2DQ14814 521 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 NKAPLQ5M9Q1 402 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 MAMDC2Q7Z304 686 aaPredicted RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 OR10R2Q8NGX6 335 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 LANCL2Q9NS86 450 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 TMEM100Q9NV29 134 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 ATXN7L1Q9ULK2 861 aaPredicted RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 PHF3Q92576 2039 aaKnown RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 MEX3AA1L020 520 aaKnown RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 PLPP3O14495 311 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 DXOO77932 396 aaKnown RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 SPP1P10451 314 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 EIF1AXP47813 144 aaKnown RBP11.06□□□□□ -0.64
NUP88-201ENST00000225696 RAB13P51153 203 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 TMEM151BQ8IW70 566 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 BAP18Q8IXM2 172 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 ARMC10Q8N2F6 343 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 SOX7Q9BT81 388 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 CENPMQ9NSP4 180 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 OR5AC2Q9NZP5 309 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 CEP290O15078 2479 aa11.06□□□□□ -0.64
NUP88-201ENST00000225696 CNTRLQ7Z7A1 2325 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 MED12Q93074 2177 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 KIR2DS5A0A0G2JLQ3 304 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 A0A0G2JNG1 304 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 TEX13DA0A0J9YY54 714 aaPredicted RBP11.05□□□□□ -0.64
NUP88-201ENST00000225696 C2orf72A6NCS6 295 aa11.05□□□□□ -0.64
NUP88-201ENST00000225696 KIR2DS3K7RE56 304 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms