RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FXYD6Q9H0Q3 95 aa19.77■□□□□ 0.76
CCDC9-201ENST00000221922 SLCO5A1Q9H2Y9 848 aa19.77■□□□□ 0.76
CCDC9-201ENST00000221922 MYOZ1Q9NP98 299 aaPredicted RBP19.77■□□□□ 0.76
CCDC9-201ENST00000221922 TMEM138Q9NPI0 162 aa19.77■□□□□ 0.76
CCDC9-201ENST00000221922 GPN3Q9UHW5 284 aaPredicted RBP19.77■□□□□ 0.76
CCDC9-201ENST00000221922 MEGF11A6BM72 1044 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 LDLRAD4O15165 306 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 PMS2P2O95744 297 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 ISG15P05161 165 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 C4orf46Q504U0 113 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 GSG1LQ6UXU4 331 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 MDGA2Q7Z553 956 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 ELP5Q8TE02 316 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 CCDC107Q8WV48 283 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 SLC25A21Q9BQT8 299 aaPredicted RBP19.77■□□□□ 0.75
CCDC9-201ENST00000221922 MED29Q9NX70 200 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 PISDQ9UG56 409 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 ZNF107Q9UII5 783 aaPredicted RBP19.77■□□□□ 0.75
CCDC9-201ENST00000221922 EMC9Q9Y3B6 208 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 B3GALT1Q9Y5Z6 326 aa19.77■□□□□ 0.75
CCDC9-201ENST00000221922 MRPS18BQ9Y676 258 aaKnown RBP19.77■□□□□ 0.75
CCDC9-201ENST00000221922 A0A0A6YYH2 397 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 A6NJ64 397 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 GDF9O60383 454 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 DKK1O94907 266 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 RPA2P15927 270 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 MC2RQ01718 297 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 PCOLCEQ15113 449 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 ALKAL2Q6UX46 152 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 CXorf58Q96LI9 332 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 POFUT1Q9H488 388 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 OR52A1Q9UKL2 312 aa19.76■□□□□ 0.75
CCDC9-201ENST00000221922 RAB3DO95716 219 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 KLK3P07288 261 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 GPR85P60893 370 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 TAGLNQ01995 201 aaKnown RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 MYBPHQ13203 477 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 GK2Q14410 553 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 C3orf33Q6P1S2 294 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 OR10H5Q8NGA6 315 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 SPACA9Q96E40 222 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 SLC25A44Q96H78 314 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 NKX3-1Q99801 234 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 KLHL13Q9P2N7 655 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 HRH3Q9Y5N1 445 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 SHISA8B8ZZ34 492 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 DNASE1L1P49184 302 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 BIDP55957 195 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 TMEM244Q5VVB8 128 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 ADGRE4PQ86SQ3 457 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.75■□□□□ 0.75
CCDC9-201ENST00000221922 OR13C3Q8NGS6 347 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 POC1BQ8TC44 478 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 RASL10BQ96S79 203 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 PPA2Q9H2U2 334 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 G6PC2Q9NQR9 355 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 FBXO4Q9UKT5 387 aa19.75■□□□□ 0.75
CCDC9-201ENST00000221922 LOC390937A0A1W2PQ73 354 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 TMEM82A0PJX8 343 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 EFNA2O43921 213 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 CD74P04233 296 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 FCER2P06734 321 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 H2BFMP0C1H6 154 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 OR4E1P0C645 316 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 UBCP0CG48 685 aaKnown RBP19.74■□□□□ 0.75
CCDC9-201ENST00000221922 LRFN4Q6PJG9 635 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 ZNF627Q7L945 461 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 LINC00346Q8IVM7 164 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 OR2M3Q8NG83 312 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 OR6K3Q8NGY3 331 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 COQ8AQ8NI60 647 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 RNF133Q8WVZ7 376 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 PTX4Q96A99 478 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 LINC00052Q96N35 136 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 C1QTNF6Q9BXI9 259 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 TMEM269A0A1B0GVZ9 245 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 LOC107986453A0A1B0GWG9 222 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 RFPL4AA6NLU0 287 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 A8MXK9 166 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 RFPL4AL1F8VTS6 287 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 HOXD4P09016 255 aaPredicted RBP19.74■□□□□ 0.75
CCDC9-201ENST00000221922 ZNF735P0CB33 412 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 C1orf100Q5SVJ3 147 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 C11orf88Q6PI97 169 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 OVCH2Q7RTZ1 564 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 LYPD6Q86Y78 171 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 UEVLDQ8IX04 471 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 EDEM2Q9BV94 578 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 B3GAT1Q9P2W7 334 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 CGGBP1Q9UFW8 167 aaPredicted RBP19.74■□□□□ 0.75
CCDC9-201ENST00000221922 SESN1Q9Y6P5 492 aa19.74■□□□□ 0.75
CCDC9-201ENST00000221922 IGKV1D-43A0A0B4J1Z2 117 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 BET1O15155 118 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 CCL4P13236 92 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 FKBP2P26885 142 aaKnown RBP19.73■□□□□ 0.75
CCDC9-201ENST00000221922 LY6G6FQ5SQ64 297 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 THEM4Q5T1C6 240 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 ZNF660Q6AZW8 331 aaPredicted RBP19.73■□□□□ 0.75
CCDC9-201ENST00000221922 WDFY1Q8IWB7 410 aa19.73■□□□□ 0.75
CCDC9-201ENST00000221922 GALNT16Q8N428 558 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms