RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CX3CR1P49238 355 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 CDH15P55291 814 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 TPTEP56180 551 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 OR2G6Q5TZ20 316 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 ADAM5Q6NVV9 412 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 IL17RDQ8NFM7 739 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 N6AMT1Q9Y5N5 214 aa23.58■■□□□ 1.36
CHMP4B-201ENST00000217402 ICE1Q9Y2F5 2266 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 ZNF254O75437 659 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 ABHD16AO95870 558 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 ACSM4P0C7M7 580 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 SLC2A1P11166 492 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 OTX1P32242 354 aaPredicted RBP23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 WNT5AP41221 380 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 NAA40Q86UY6 237 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 KLHL36Q8N4N3 616 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 HS3ST6Q96QI5 342 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 SIGLEC11Q96RL6 698 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 BRD7Q9NPI1 651 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 DOPEY2Q9Y3R5 2298 aa23.57■■□□□ 1.36
CHMP4B-201ENST00000217402 MYL12BO14950 172 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 SULT1C4O75897 302 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 TNFAIP8O95379 198 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 CD3EP07766 207 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 FAM157BP0CG42 384 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 KCTD21Q4G0X4 260 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 SLC22A25Q6T423 547 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 PRSS48Q7RTY5 328 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 ZNF101Q8IZC7 436 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 C4orf45Q96LM5 186 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 DOK1Q99704 481 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 CDCA4Q9BXL8 241 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 KCNN3Q9UGI6 736 aa23.56■■□□□ 1.36
CHMP4B-201ENST00000217402 NR1H2P55055 460 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 LIPNQ5VXI9 398 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 TMPRSS11AQ6ZMR5 421 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 SPRYD4Q8WW59 207 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 MYCBPQ99417 103 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 NIPAL2Q9H841 368 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 PLEKHB1Q9UF11 243 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 ERGIC3Q9Y282 383 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 CAB39Q9Y376 341 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 RTTNQ86VV8 2226 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 ANXA2P07355 339 aaKnown RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 PSMB10P40306 273 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 ZNF121P58317 390 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 PSMA6P60900 246 aaKnown RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 MFGE8Q08431 387 aaPredicted RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 SYS1Q8N2H4 156 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 DCLRE1CQ96SD1 692 aaKnown RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 EIF3KQ9UBQ5 218 aaKnown RBP23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 GTF2A1LQ9UNN4 478 aa23.55■■□□□ 1.36
CHMP4B-201ENST00000217402 TACSTD2P09758 323 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 ANOS1P23352 680 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 LOXP28300 417 aaPredicted RBP23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 DAZAP2Q15038 168 aaPredicted RBP23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 DRAM2Q6UX65 266 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 RFPL4BQ6ZWI9 263 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 KCTD20Q7Z5Y7 419 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 KBTBD8Q8NFY9 601 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 ABHD4Q8TB40 342 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 GATAD2BQ8WXI9 593 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 PELI1Q96FA3 418 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 RNF115Q9Y4L5 304 aa23.54■■□□□ 1.36
CHMP4B-201ENST00000217402 TMEM269A0A1B0GVZ9 245 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 A6NNC1 897 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 NGFP01138 241 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 MT-ND5P03915 603 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 LCATP04180 440 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 MAP2K4P45985 399 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 IRF3Q14653 427 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 ZNF829Q3KNS6 432 aaPredicted RBP23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 ARL9Q6T311 187 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 OR52N1Q8NH53 320 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 POU2F3Q9UKI9 436 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 CADP27708 2225 aa23.53■■□□□ 1.36
CHMP4B-201ENST00000217402 TMEM129A0AVI4 362 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 SMPD2O60906 423 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 PNPP00491 289 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 PLAUP00749 431 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 APOC1P02654 83 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 DCTDP32321 178 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 SNTB2Q13425 540 aaKnown RBP23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 RNLSQ5VYX0 342 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 FAM57BQ71RH2 274 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 NANOGP1Q8N7R0 232 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 NR1H4Q96RI1 486 aaPredicted RBP23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 MND1Q9BWT6 205 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 FAM206AQ9NX38 181 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 SNX5Q9Y5X3 404 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 R4GMQ9 66 aa23.52■■□□□ 1.36
CHMP4B-201ENST00000217402 C5orf63A6NC05 138 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 UCP2P55851 309 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 SNAI3Q3KNW1 292 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 KLBQ86Z14 1044 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 RORBQ92753 470 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 ATP23Q9Y6H3 246 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 TRIM64A6NGJ6 449 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 SHISA9B4DS77 424 aa23.51■■□□□ 1.35
CHMP4B-201ENST00000217402 LOC110117498-PIK3R3F6TDL0 507 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms