RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 NXT1Q9UKK6 140 aaKnown RBP11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 STMND1H3BQB6 276 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 DDAH2O95865 285 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 PI3P19957 117 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 KLF9Q13886 244 aaPredicted RBP11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 ARL6IP1Q15041 203 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 ZNF585AQ6P3V2 769 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 PCDHB16Q9NRJ7 776 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 A0A0B4J293 547 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 ANKRD20A5PA0PJZ0 165 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 SCO1O75880 301 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 TGM6O95932 706 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 ABOP16442 354 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 HTR5AP47898 357 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 OR52W1Q6IF63 320 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 AAED1Q7RTV5 226 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 YRDCQ86U90 279 aaKnown RBP11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 D2HGDHQ8N465 521 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 GJC3Q8NFK1 279 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 IFI44Q8TCB0 444 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 C12orf10Q9HB07 376 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 FBXO4Q9UKT5 387 aa11.08□□□□□ -0.64
TM9SF4-201ENST00000217315 TMEM272A0A1B0GTI8 110 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 ZNF705EA8MWA4 302 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 RBMXL2O75526 392 aaKnown RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 POU3F2P20265 443 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 LUMP51884 338 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 EFNB2P52799 333 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 UNQ6126/PRO20091Q6UXV3 157 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 ANKRD37Q7Z713 158 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 SPACA9Q96E40 222 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 WDR89Q96FK6 387 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 VRK1Q99986 396 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 PCED1AQ9H1Q7 454 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 PPA2Q9H2U2 334 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 LANCL2Q9NS86 450 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 B4GALT7Q9UBV7 327 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 MLXQ9UH92 298 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 SPTA1P02549 2419 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 IGHV3-9P01782 118 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 BGLAPP02818 100 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 TCN2P20062 427 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 ZNF121P58317 390 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 MFGE8Q08431 387 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 C9orf62Q8N4C0 152 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 PIGCQ92535 297 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 GNRHR2Q96P88 292 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 GHITMQ9H3K2 345 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 MYOTQ9UBF9 498 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 LSM5Q9Y4Y9 91 aaKnown RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 HRH3Q9Y5N1 445 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 WIF1Q9Y5W5 379 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 CIB4A0PJX0 185 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 RER1O15258 196 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 GSTZ1O43708 216 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 EIF1BO60739 113 aaKnown RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 TMEM127O75204 238 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 HLA-DQB1P01920 261 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 GALNSP34059 522 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 HRH1P35367 487 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 HLA-BQ31612 363 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 LINC01590Q5TEZ4 76 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 B3GNTL1Q67FW5 361 aaPredicted RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 SGPP2Q8IWX5 399 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 FAM71CQ8NEG0 241 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 RBPMSQ93062 196 aaKnown RBP11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 B3GALT1Q9Y5Z6 326 aa11.07□□□□□ -0.64
TM9SF4-201ENST00000217315 C7orf66A4D0T2 115 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 HSPA12AO43301 675 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 CHRM2P08172 466 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 INSM1Q01101 510 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 LYPD8Q6UX82 237 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 PGAP1Q75T13 922 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 SLC51BQ86UW2 128 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 MUC20Q8N307 709 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 ZCCHC4Q9H5U6 513 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 PARPBPQ9NWS1 579 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 PADI1Q9ULC6 663 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 CTDSPLO15194 276 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 FREM3P0C091 2139 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 SUMO3P55854 103 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 VAMP2P63027 116 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 FAM76BQ5HYJ3 339 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 SLC16A14Q7RTX9 510 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 SULF2Q8IWU5 870 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 ZNF100Q8IYN0 542 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 A0A0D9SG52 128 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 OR5H14A6NHG9 310 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 NPIPB9F8W1W9 429 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 AGPAT2O15120 278 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 DBHP09172 617 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 RIN1Q13671 783 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 RFPL4BQ6ZWI9 263 aa11.06□□□□□ -0.64
TM9SF4-201ENST00000217315 P4HA3Q7Z4N8 544 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms