RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 WFDC8Q8IUA0 241 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CDH26Q8IXH8 852 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 OR1N1Q8NGS0 311 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 SIRT5Q9NXA8 310 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 LAIR1Q6GTX8 287 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CYHR1Q6ZMK1 362 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 DBX2Q6ZNG2 339 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 SSX7Q7RTT5 188 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 OR10V1Q8NGI7 309 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 OR1J2Q8NGS2 313 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 GPM6AP51674 278 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 TCTN3Q6NUS6 607 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 LGI3Q8N145 548 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 SHARPINQ9H0F6 387 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 ARL2-SNX15V9GYD0 113 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 SPINK4O60575 86 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 LRP3O75074 770 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CCL2P13500 99 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 HAAOP46952 286 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 B4GALNT1Q00973 533 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CD300CQ08708 224 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 FAM26DQ5JW98 314 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 ZNF626Q68DY1 528 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 STAC2Q6ZMT1 411 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 Q6ZS52 159 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 MAML2Q8IZL2 1156 aaPredicted RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 PBOV1Q9GZY1 135 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 C12orf10Q9HB07 376 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 EXO1Q9UQ84 846 aaKnown RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 ATP23Q9Y6H3 246 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CYTIPO60759 359 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 JUNBP17275 347 aaPredicted RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 PPIAP62937 165 aaKnown RBP12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 PRSS41Q7RTY9 318 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 FAM58AQ8N1B3 248 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 DYNC2LI1Q8TCX1 351 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 RAB9BQ9NP90 201 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 LAMB1P07942 1786 aa12.35□□□□□ -0.43
TGFBR3-201ENST00000212355 DEFB108AA8MXU0 73 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 SPINT2O43291 252 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 CXCL13O43927 109 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 F2RP25116 425 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 GRB2P62993 217 aaKnown RBP12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 Q6ZRG5 221 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 ACKR3P25106 362 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 CST5P28325 142 aaPredicted RBP12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 LYSMD1Q96S90 227 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 ICAM2P13598 275 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 COL19A1Q14993 1142 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 PLA1AQ53H76 456 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 LRP11Q86VZ4 500 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 OR10X1Q8NGY0 326 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 STACQ99469 402 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 A4GNTQ9UNA3 340 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 B3GALT5Q9Y2C3 310 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 PIGBOS1A0A0B4J2F0 54 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 H2AFB1P0C5Y9 115 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 OR5G3P0C626 314 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 NME1P15531 152 aaKnown RBP12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 DEFB109BQ30KR1 87 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 CD276Q5ZPR3 534 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 CREB3L2Q70SY1 520 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 KTI12Q96EK9 354 aaPredicted RBP12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 MRGPRX1Q96LB2 322 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 PLA2G3Q9NZ20 509 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 FAHP16930 419 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 YIPF6Q96EC8 236 aa12.34□□□□□ -0.43
TGFBR3-201ENST00000212355 SLC6A12P48065 614 aa12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 GNB2P62879 340 aa12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 INSM1Q01101 510 aaPredicted RBP12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 KIRREL2Q6UWL6 708 aa12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 TREM2Q9NZC2 230 aa12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.43
TGFBR3-201ENST00000212355 OR4E1P0C645 316 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC25A6P12236 298 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 RBP2P50120 134 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 LGALS4P56470 323 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 DOC2BQ14184 412 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 SLC35D3Q5M8T2 416 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 SMIM15Q7Z3B0 74 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 GCNT2Q8N0V5 402 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 OLIG1Q8TAK6 271 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 WDR89Q96FK6 387 aaPredicted RBP12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
TGFBR3-201ENST00000212355 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms