RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Slc39a8Q91W10 462 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 MallQ91X49 154 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Q9CRW3 126 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 RetnlaQ9EP95 111 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Stard5Q9EPQ7 213 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Arl6ip1Q9JKW0 203 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Spta1P08032 2415 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1130A0A1L1SQT2 314 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1129A2AV41 314 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1164A2AVT5 326 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rnaset2aC0HKG5 259 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rnaset2bC0HKG6 259 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 JPT1P97825 154 aaKnown RBP8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Lgals3bpQ07797 577 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ltc4sQ60860 150 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Plpp1Q61469 283 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Pon3Q62087 354 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Mapk3Q63844 380 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Rspry1Q8BVR6 576 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Upp2Q8CGR7 320 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr510Q8VEW6 314 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr678Q8VG26 313 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Masp2Q91WP0 685 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 AldobQ91Y97 364 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Emc6Q9CQW0 110 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Lin37Q9D8N6 246 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm26992S4R1A3 76 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Col24a1Q30D77 1733 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Igkv12-44A0A140T8M2 115 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn2r58K7N6V2 862 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Ccl22O88430 92 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Hmgn2P09602 90 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Sod2P09671 222 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Dusp1P28563 367 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm648Q3UJ22 213 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Nhlrc4Q3UP44 136 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Fbxw22Q5XG67 466 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Orm3Q63805 206 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Tas2r116Q7M713 305 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr429Q7TRW1 312 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Zc3h12dQ8BIY3 533 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Stbd1Q8C7E7 338 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Plcz1Q8K4D7 647 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Olfr1501Q8VFQ3 315 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Cst14Q8VII3 130 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Defb8Q91V82 60 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Egln2Q91YE2 419 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Lamtor1Q9CQ22 161 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Susd3Q9D176 269 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Trp53tg5Q9D976 238 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Tex33Q9D9J2 266 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Vmn1r56Q9EPS9 310 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Izumo1rQ9EQF4 244 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Isg20Q9JL16 300 aa8.84□□□□□ -0.99
Pcdh1-201ENSMUST00000057185 Gm28102A0A087WQL3 222 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Tox2A2A472 547 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm572B1ARY8 399 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 H2-T10F6T1I5 379 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Sp100O35892 482 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 AanatO88816 205 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Pou3f1P21952 449 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Nkx2-2P42586 273 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 4930480E11RikQ0VG34 394 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 CebpeQ6PZD9 281 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Serinc5Q8BHJ6 461 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gpr89aQ8BS95 455 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Foxj3Q8BUR3 623 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 SprnQ8BWU1 147 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Zfand2bQ91X58 257 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ripply3Q924S9 152 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ubqln4Q99NB8 596 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 2610524H06RikQ9CZU9 139 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 MNCb-2990Q9JJ93 142 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ighv1-24A0A0A6YY24 117 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gm35315A0A1B0GRI2 571 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Prl8a2O54832 240 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 P18533 117 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Gstm3P19639 218 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 NodalP43021 354 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 GipP48756 144 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 BidP70444 195 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Lemd1Q14C37 129 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Ttyh2Q3TH73 532 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Plpp5Q3UMZ3 260 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Nup62Q63850 526 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Npepl1Q6NSR8 524 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Olfr1321Q7TQW4 319 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 9130023H24RikQ8BG98 337 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 CmblQ8R1G2 245 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 CthQ8VCN5 398 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Flvcr2Q91X85 551 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Slc19a3Q99PL8 488 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Slc48a1Q9D8M3 146 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Mrpl39Q9JKF7 336 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 D17h6s53eQ9Z1R4 293 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Scgb1b30A2BH64 92 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Vmn2r124K7N789 855 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Fbxw15L7N1X6 466 aa8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Prdx6O08709 224 aaKnown RBP8.83□□□□□ -1
Pcdh1-201ENSMUST00000057185 Mcpt9O35164 246 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms