RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 RangrfQ9JIB0 185 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 SigirrQ9JLZ8 409 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gab1Q9QYY0 695 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fer1l5P0DM40 2038 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Prob1A0A087WR45 1010 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr663A0A1B0GSI9 319 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tmem74bA2AU34 232 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Nlgn4lB0F2B4 945 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Znf296E9Q6W4 445 aaKnown RBP12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr741L7N1Y5 311 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mtnd4lP03903 98 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Alox5apP30355 161 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Resp18P47939 175 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tmem14aP56983 99 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 FapP97321 761 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Bbs12Q5SUD9 708 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 SprQ64105 261 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 ApoolQ78IK4 265 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr285Q7TS17 319 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Pgm2Q7TSV4 620 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Znf2Q8BIQ3 427 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Commd2Q8BXC6 199 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Kremen2Q8K1S7 461 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Aspscr1Q8VBT9 550 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 DapQ91XC8 102 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Egln2Q91YE2 419 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ndufb2Q9CPU2 105 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Arpc5Q9CPW4 151 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 PigkQ9CXY9 395 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fam96bQ9D187 163 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tysnd1Q9DBA6 568 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 B4galt2Q9Z2Y2 369 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Exph5Q0VAV2 1960 aa12.16□□□□□ -0.46
Nup88-201ENSMUST00000035283 Gm3854A0A1B0GSS6 495 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fam90a1aA2A4E2 429 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mettl11bB2RXM4 283 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Omt2aF6ZJR3 104 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr597L7N224 315 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Slc16a7O70451 484 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ighg1P01869 393 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Zfp11P10751 647 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Ier2P17950 221 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Muc13P19467 573 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mst1P26928 716 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Plpp1Q61469 283 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Drd1Q61616 446 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Inca1Q6PKN7 231 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cpeb3Q7TN99 716 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mettl20Q80ZM3 255 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 B130006D01RikQ8BRH6 153 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 CenpoQ8K015 298 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 CthQ8VCN5 398 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Dusp18Q8VE01 188 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1495Q8VEZ4 319 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1388Q8VFA3 311 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Pcdhb20Q91XZ9 799 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Chrm5Q920H4 532 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Rbm18Q9CR83 190 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Herpud2Q9JJC9 404 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 TollipQ9QZ06 274 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Igf2rQ07113 2483 aaKnown RBP12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Vmn2r49D3Z6L3 852 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Vmn1r120K7N6J6 305 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1218L7MU54 311 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Wnt9bO35468 359 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Galr2O88854 371 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tpi1P17751 299 aaKnown RBP12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 MagP20917 626 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Taf13P61216 124 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Map2k6P70236 334 aaKnown RBP12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Fkbp10Q61576 581 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr1166Q7TR27 316 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr884Q7TRE1 309 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Cdhr3Q8BL00 831 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Q8C784 167 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Rhno1Q8K3A4 235 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Slc35a3Q8R1T4 326 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Seh1lQ8R2U0 360 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mic13Q8R404 119 aaKnown RBP12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr826Q8VFU6 313 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr825Q8VFU7 320 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Olfr676Q8VGZ9 317 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Nt5dc2Q91X76 390 aaKnown RBP12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Mpped2Q9CZJ0 294 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 Tssk4Q9D411 328 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 1700013G24RikQ9DAC6 286 aa12.15□□□□□ -0.46
Nup88-201ENSMUST00000035283 DmdP11531 3678 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tmem185aA2AF53 350 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr571E9Q407 322 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 PlgP20918 812 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Lyl1P27792 278 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Rab11bP46638 218 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr1136Q0VBI4 310 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Wfdc5Q4KXB6 126 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Lin54Q571G4 749 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 SrmQ64674 302 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Kng2Q6S9I3 644 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Vmn1r208Q8R275 308 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 BanpQ8VBU8 548 aa12.14□□□□□ -0.47
Nup88-201ENSMUST00000035283 Flvcr2Q91X85 551 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 49 ms