RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Aqp3Q8R2N1 292 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 LsrQ99KG5 594 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 Coq5Q9CXI0 327 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 PbkQ9JJ78 330 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc39a1Q9QZ03 324 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 MeltfQ9R0R1 738 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ptdss2Q9Z1X2 473 aa14.7□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pm20d2A3KG59 431 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 C2cd6E9Q152 557 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gm21103E9Q2Q1 267 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Sp100O35892 482 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Galr3O88853 370 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 P20040 264 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 AgrpP56473 131 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Adam5Q3TTE0 751 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc35f2Q7TML3 375 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr1229Q7TQZ9 311 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr479Q7TRV1 327 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc35e4Q8K3D6 351 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Lsm10Q8QZX5 122 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 MrgprgQ91ZB5 289 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Syt17Q920M7 470 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Acss1Q99NB1 682 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mrpl14Q9D1I6 145 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Usp18Q9WTV6 368 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mbd4Q9Z2D7 554 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Dusp1P28563 367 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Wbp1P97764 304 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Atg4dQ8BGV9 474 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Cggbp1Q8BHG9 167 aaKnown RBP14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Arrb1Q8BWG8 418 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Lmf2Q8C3X8 702 aaKnown RBP14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 FntbQ8K2I1 437 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Babam2Q8K3W0 383 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc7a13Q91WN3 478 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Commd4Q9CQ02 199 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Q9CRW3 126 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc25a18Q9DB41 320 aa14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Dock7Q8R1A4 2130 aaKnown RBP14.69□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ighv1-24A0A0A6YY24 117 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Tmem185aA2AF53 350 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gm11168J3QN50 228 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Vmn2r58K7N6V2 862 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ascl4M0QW46 144 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Entpd2O55026 495 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rbbp9O88851 186 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 P06336 421 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 UoxP25688 303 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mst1P26928 716 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Aldh3a2P47740 484 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Klhl8P59280 629 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Wfdc18P62810 74 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Prtn3Q61096 254 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Galk2Q68FH4 458 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Scmh1Q8K214 706 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Vmn1r210Q8R274 306 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr47Q8VF18 321 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr95Q8VFE2 312 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Scgb3a1Q920D7 104 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 BlvrbQ923D2 206 aaKnown RBP14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ufsp2Q99K23 461 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mrps14Q9CR88 128 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Xrcc2Q9CX47 278 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Supt7lQ9CZV5 412 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Lypd6bQ9D7F2 191 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gvin1Q80SU7 2427 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ier3P46694 153 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Zfp180Q6NZI9 655 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 EnkurQ6SP97 255 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Fam98bQ80VD1 429 aaKnown RBP14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pcyt1bQ811Q9 369 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Nudt9Q8BVU5 350 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 CenpxQ8C4X1 78 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 SdhbQ9CQA3 282 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Mettl18Q9CZ09 362 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 CmipQ9D486 773 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Slc25a27Q9D6D0 322 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Dennd6bQ9D9V7 585 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 RhcgQ9QXP0 498 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr545Q9WU94 316 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Nprl2Q9WUE4 380 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Gm28710A0A1B0GR31 962 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr1205A2ATJ7 307 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rhox1B1APN4 224 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr68E9PYY2 315 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Hnrnpa2b1O88569 353 aaKnown RBP14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Kcnj15O88932 375 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 PlgP20918 812 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Rag2P21784 527 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Ly6fP35460 134 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Fv1P70213 459 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Csrp2P97314 193 aaKnown RBP14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 XylbQ3TNA1 551 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Fam122bQ6NZE7 255 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Pgm2Q7TSV4 620 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Tnfsfm13Q8BXS2 410 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Csnka2ipQ8CH19 720 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Sav1Q8VEB2 386 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 Olfr1388Q8VFA3 311 aa14.68□□□□□ -0.06
Trim28-201ENSMUST00000005705 St3gal6Q8VIB3 329 aa14.68□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms